RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ATP5OP48047 213 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 HK2P52789 917 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 EFNA5P52803 228 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 AQP5P55064 265 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 SNX16P57768 344 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 RPL7AP62424 266 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 MAP3K10Q02779 954 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 SLC25A11Q02978 314 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 KDSRQ06136 332 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 BST1Q10588 318 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 CDC16Q13042 620 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 LSAMPQ13449 338 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 TRPC3Q13507 836 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 GRM2Q14416 872 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 EMC2Q15006 297 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 EFTUD2Q15029 972 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 R3HDM1Q15032 1099 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 CHI3L2Q15782 390 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 UGCGQ16739 394 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 DUOXA2Q1HG44 320 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 INSCQ1MX18 579 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 SHROOM1Q2M3G4 852 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 CNPY1Q3B7I2 92 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 KBTBD12Q3ZCT8 623 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ANKRD22Q5VYY1 191 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 STYK1Q6J9G0 422 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 GPAT2Q6NUI2 795 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZFP1Q6P2D0 407 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZPBP2Q6X784 338 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 SH2D5Q6ZV89 423 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 CYS1Q717R9 158 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ANO5Q75V66 913 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 SLC51AQ86UW1 340 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 AMIGO3Q86WK7 504 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 CDKL3Q8IVW4 592 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ARID3BQ8IVW6 561 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 BRSK2Q8IWQ3 736 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 CTAGE3PQ8IX95 158 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 EXOC8Q8IYI6 725 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 TTC39CQ8N584 583 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 PPM1NQ8N819 430 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 GLIS1Q8NBF1 620 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 SLC4A11Q8NBS3 891 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 CMASQ8NFW8 434 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 GSDMBQ8TAX9 411 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 RNF217Q8TC41 542 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ACER1Q8TDN7 264 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ACTRT2Q8TDY3 377 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 WDR60Q8WVS4 1066 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 CLEC4DQ8WXI8 215 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 BSNDQ8WZ55 320 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 IRGQQ8WZA9 623 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 CDKL2Q92772 493 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 EZH1Q92800 747 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ITFG2Q969R8 447 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 PPP1R14BQ96C90 147 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 DGCR14Q96DF8 476 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 RTP4Q96DX8 246 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 HIC2Q96JB3 615 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 SERAC1Q96JX3 654 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 NLRP4Q96MN2 994 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 RMDN3Q96TC7 470 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 NDNQ99608 321 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 KLF6Q99612 283 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 FERMT1Q9BQL6 677 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 THTPAQ9BU02 230 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 CCDC106Q9BWC9 280 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 TDRD3Q9H7E2 651 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 NRDE2Q9H7Z3 1164 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZNF395Q9H8N7 513 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 DBNDD1Q9H9R9 158 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 PRDM16Q9HAZ2 1276 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ALG13Q9NP73 1137 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 POLMQ9NP87 494 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 TIMMDC1Q9NPL8 285 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 PDLIM7Q9NR12 457 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 PXMP2Q9NR77 195 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 METTL5Q9NRN9 209 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 MRGBPQ9NV56 204 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 DNAJC28Q9NX36 388 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 PTTG2Q9NZH5 202 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 HACD3Q9P035 362 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 C6orf203Q9P0P8 240 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 GABBR1Q9UBS5 961 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZC3H7BQ9UGR2 993 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 MID2Q9UJV3 735 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 DNMT3LQ9UJW3 386 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 PLA2G4CQ9UP65 541 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 HBS1LQ9Y450 684 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 GMEB1Q9Y692 573 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 THSD7AQ9UPZ6 1657 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 A0A0B4J269 797 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 GOLGA8QA0A0J9YX86 632 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 BCLAF3A2AJT9 711 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 GOLGA8OA6NCC3 632 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 SDR42E2A6NKP2 422 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZNF487B1APH4 448 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 GOLGA8NF8WBI6 632 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 NFIBO00712 420 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 CASQ2O14958 399 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms