RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 THAP2Q9H0W7 228 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 CD320Q9NPF0 282 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 PARVAQ9NVD7 372 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 SMPD4Q9NXE4 827 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 RRN3Q9NYV6 651 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.41□□□□□ -0.26
TCOF1-210ENST00000506767 CNOT8Q9UFF9 292 aaKnown RBP13.41□□□□□ -0.26
TCOF1-210ENST00000506767 RASAL2Q9UJF2 1139 aa13.41□□□□□ -0.26
TCOF1-210ENST00000506767 NCOR1O75376 2440 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 E2F8A0AVK6 867 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 C2CD4BA6NLJ0 364 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 EIF3CLB5ME19 914 aaKnown RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 ATMINO43313 823 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 STC2O76061 302 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 GJB6O95452 261 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 TRUB2O95900 331 aaKnown RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 IGLV3-27P01718 113 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 CYP1A2P05177 515 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 ASGR2P07307 311 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 PSMC3P17980 439 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 ABCB4P21439 1286 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 RFC1P35251 1148 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 CYLC1P35663 651 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 GPC5P78333 572 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 PITX1P78337 314 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 TRIP4Q15650 581 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 C10orf76Q5T2E6 689 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 OTUD1Q5VV17 481 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 DNAJC24Q6P3W2 148 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 RAD9BQ6WBX8 426 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 TAC4Q86UU9 113 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 MIB1Q86YT6 1006 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 EMC1Q8N766 993 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 DEPDC1BQ8WUY9 529 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 WBP2Q969T9 261 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 ZNF653Q96CK0 615 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 PGAP3Q96FM1 320 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 EIF3CQ99613 913 aaKnown RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 CALCOCO1Q9P1Z2 691 aa13.4□□□□□ -0.26
TCOF1-210ENST00000506767 HBS1LQ9Y450 684 aaKnown RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 EPN1Q9Y6I3 576 aaPredicted RBP13.4□□□□□ -0.26
TCOF1-210ENST00000506767 SLC12A8A0AV02 714 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 TMEM191CA6NGB0 347 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 IRAK2O43187 625 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 MSI1O43347 362 aaKnown RBP13.39□□□□□ -0.27
TCOF1-210ENST00000506767 ENDOD1O94919 500 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 NDUFA10O95299 355 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 H2AFZP0C0S5 128 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 TMEM253P0C7T8 217 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 TFE3P19532 575 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-210ENST00000506767 PTPN9P43378 593 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 KPNA1P52294 538 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-210ENST00000506767 RPL7AP62424 266 aaKnown RBP13.39□□□□□ -0.27
TCOF1-210ENST00000506767 RING1Q06587 406 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 MTF1Q14872 753 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 SLC25A52Q3SY17 297 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 CCDC14Q49A88 953 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 HTR3DQ70Z44 454 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 H2AFVQ71UI9 128 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 RNF135Q8IUD6 432 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 LRRC8AQ8IWT6 810 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 RXFP2Q8WXD0 754 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 CENPIQ92674 756 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-210ENST00000506767 ANP32BQ92688 251 aaKnown RBP13.39□□□□□ -0.27
TCOF1-210ENST00000506767 PLD4Q96BZ4 506 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 ARHGEF26Q96DR7 871 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 SLC39A13Q96H72 371 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 FCRL2Q96LA5 508 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-210ENST00000506767 SERPINB11Q96P15 392 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 FAM83CQ9BQN1 747 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 PACSIN1Q9BY11 444 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 MRPL47Q9HD33 250 aaKnown RBP13.39□□□□□ -0.27
TCOF1-210ENST00000506767 CFAP97Q9P2B7 532 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 RAPGEFL1Q9UHV5 662 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 INTUQ9ULD6 942 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 STAP1Q9ULZ2 295 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 TLR6Q9Y2C9 796 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 SCINQ9Y6U3 715 aa13.39□□□□□ -0.27
TCOF1-210ENST00000506767 MYO10Q9HD67 2058 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 ARNTLO00327 626 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 CHADO15335 359 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 KLKB1P03952 638 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 PDGFRAP16234 1089 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 COL9A1P20849 921 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 GBP1P32455 592 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 TBX4P57082 545 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 OGDHQ02218 1023 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 TDGQ13569 410 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 GRM2Q14416 872 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 ARHGAP29Q52LW3 1261 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 Q6ZNB5 142 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 ADAM32Q8TC27 787 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 CFAP57Q96MR6 1250 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 MCEEQ96PE7 176 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 TBCBQ99426 244 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 TRMT61BQ9BVS5 477 aaKnown RBP13.38□□□□□ -0.27
TCOF1-210ENST00000506767 TMEM51Q9NW97 253 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 MYO1AQ9UBC5 1043 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 SORCS3Q9UPU3 1222 aa13.38□□□□□ -0.27
TCOF1-210ENST00000506767 SH3BP1Q9Y3L3 701 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms