RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 MRPS9P82933 396 aaKnown RBP17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 ROR1Q01973 937 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 MTMR1Q13613 665 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 GK3PQ14409 553 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 ZYXQ15942 572 aaKnown RBP17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 CHURC1Q8WUH1 139 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 PRPF18Q99633 342 aaKnown RBP17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 FAM96AQ9H5X1 160 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 THEGQ9P2T0 379 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 SPDYE16A6NNV3 312 aaPredicted RBP17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 ZNF195O14628 629 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 CPA3P15088 417 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 ACOT2P49753 483 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 SH3D19Q5HYK7 790 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 RARS2Q5T160 578 aaKnown RBP17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 MROH9Q5TGP6 573 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 PAOXQ6QHF9 649 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 TIFABQ6ZNK6 161 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 TSHZ1Q6ZSZ6 1077 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 CAND1Q86VP6 1230 aaKnown RBP17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 FLAD1Q8NFF5 587 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 CMASQ8NFW8 434 aaPredicted RBP17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 CEP70Q8NHQ1 597 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 CNBD2Q96M20 576 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 ARHGAP26Q9UNA1 814 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 TMX2Q9Y320 296 aa17.67■□□□□ 0.42
SQSTM1-211ENST00000506690 MAGEB3O15480 346 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 STAM2O75886 525 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 PRDX6P30041 224 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 MAGEA10P43363 369 aaPredicted RBP17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 PPIDQ08752 370 aaKnown RBP17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 PEX6Q13608 980 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 KLHL35Q6PF15 583 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 DARS2Q6PI48 645 aaKnown RBP17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 ATG14Q6ZNE5 492 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 FNDC8Q8TC99 324 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 ACER1Q8TDN7 264 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 JDP2Q8WYK2 163 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 RAB6BQ9NRW1 208 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 EMCNQ9ULC0 261 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 AK5Q9Y6K8 562 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 LOC100653049A0A140TA62 436 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 FAM159BA6NKW6 160 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 H3BSA7 217 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 KRT34O76011 436 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 CCNE2O96020 404 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 FAM58BPP0C7Q3 252 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 OSBPP22059 807 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 EIF4BP23588 611 aaKnown RBP17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 NOMO1Q15155 1222 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 ADRM1Q16186 407 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 GPAT2Q6NUI2 795 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 IYDQ6PHW0 289 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 UNC5AQ6ZN44 842 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 RSPH3Q86UC2 560 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 KCTD6Q8NC69 237 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 CATSPER1Q8NEC5 780 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 JOSD2Q8TAC2 188 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 FNIP1Q8TF40 1166 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 SORT1Q99523 831 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 MRIQ9BWK5 157 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 STK39Q9UEW8 545 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 RGS17Q9UGC6 210 aaPredicted RBP17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 RIMS3Q9UJD0 308 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 STYXL1Q9Y6J8 313 aa17.66■□□□□ 0.42
SQSTM1-211ENST00000506690 MYOCOSA0A1B0GUC4 107 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 SLC15A5A6NIM6 579 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 COX4I1P13073 169 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 NPR1P16066 1061 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 LIG4P49917 911 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 JAK3P52333 1124 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 PLOD1Q02809 727 aaPredicted RBP17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 ADGRE1Q14246 886 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 C1QTNF12Q5T7M4 302 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 PHTF2Q8N3S3 785 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 ZBTB8BQ8NAP8 495 aaPredicted RBP17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 ADCY4Q8NFM4 1077 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 TBCCD1Q9NVR7 557 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 PNPOQ9NVS9 261 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 AGO2Q9UKV8 859 aaKnown RBP17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 SH3GLB1Q9Y371 365 aa17.65■□□□□ 0.42
SQSTM1-211ENST00000506690 TMEM221A6NGB7 291 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 WDR64B1ANS9 1081 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 CAPNS1P04632 268 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 KRT3P12035 628 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 ALDH1B1P30837 517 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 SERPINB9P50453 376 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 RPL10AP62906 217 aaKnown RBP17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 CNTN2Q02246 1040 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 TMEM62Q0P6H9 643 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 LPIN1Q14693 890 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 TRMT10BQ6PF06 316 aaKnown RBP17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 NPNTQ6UXI9 565 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 LRGUKQ96M69 825 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 RTKNQ9BST9 563 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 IFT122Q9HBG6 1241 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 TMOD2Q9NZR1 351 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 PAK5Q9P286 719 aa17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 GNEQ9Y223 722 aaKnown RBP17.64■□□□□ 0.42
SQSTM1-211ENST00000506690 E9PBE3 544 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms