RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 CYP2F1P24903 491 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 ADRA1BP35368 520 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 GRIK1P39086 918 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 PSEN1P49768 467 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 SLMAPQ14BN4 828 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 CA9Q16790 459 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 ARL13BQ3SXY8 428 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 BRMS1LQ5PSV4 323 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 RTP2Q5QGT7 225 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 C4orf22Q6V702 233 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 BZW1Q7L1Q6 419 aaKnown RBP13.81□□□□□ -0.2
LMNA-220ENST00000504687 MON1AQ86VX9 555 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 CCDC185Q8N715 623 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 FBXO25Q8TCJ0 367 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.81□□□□□ -0.2
LMNA-220ENST00000504687 NDRG1Q92597 394 aaKnown RBP13.81□□□□□ -0.2
LMNA-220ENST00000504687 P3H4Q92791 437 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 TRIM43Q96BQ3 446 aaPredicted RBP13.81□□□□□ -0.2
LMNA-220ENST00000504687 SH3GL2Q99962 352 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 HINFPQ9BQA5 517 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 SMOC2Q9H3U7 446 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 ASIC3Q9UHC3 531 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 MAFFQ9ULX9 164 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 ZNF148Q9UQR1 794 aa13.81□□□□□ -0.2
LMNA-220ENST00000504687 MTMR11A4FU01 709 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 H3BRJ5 948 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 HAPLN1P10915 354 aaPredicted RBP13.8□□□□□ -0.2
LMNA-220ENST00000504687 RARGP13631 454 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 RAG1P15918 1043 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 LAG3P18627 525 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 ARL4AP40617 200 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 WDR5P61964 334 aaKnown RBP13.8□□□□□ -0.2
LMNA-220ENST00000504687 YWHAGP61981 247 aaKnown RBP eCLIP13.8□□□□□ -0.2
LMNA-220ENST00000504687 RPL10AP62906 217 aaKnown RBP13.8□□□□□ -0.2
LMNA-220ENST00000504687 LLGL1Q15334 1064 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 EFHC2Q5JST6 749 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 CFAP58Q5T655 872 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 HIBCHQ6NVY1 386 aaPredicted RBP13.8□□□□□ -0.2
LMNA-220ENST00000504687 PCGF5Q86SE9 256 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 SLC39A11Q8N1S5 342 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 TSEN2Q8NCE0 465 aaKnown RBP13.8□□□□□ -0.2
LMNA-220ENST00000504687 BCL7CQ8WUZ0 217 aaPredicted RBP13.8□□□□□ -0.2
LMNA-220ENST00000504687 CCDC114Q96M63 670 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 ZNF558Q96NG5 402 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 CSPG4P5Q96PW8 444 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 KCTD15Q96SI1 283 aaPredicted RBP13.8□□□□□ -0.2
LMNA-220ENST00000504687 HERC2P3Q9BVR0 1158 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 OSBPL2Q9H1P3 480 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 PLEKHA4Q9H4M7 779 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 DHX35Q9H5Z1 703 aaKnown RBP13.8□□□□□ -0.2
LMNA-220ENST00000504687 IL23AQ9NPF7 189 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 PIGVQ9NUD9 493 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 ABI2Q9NYB9 513 aaPredicted RBP13.8□□□□□ -0.2
LMNA-220ENST00000504687 CLIC5Q9NZA1 410 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 CWC15Q9P013 229 aaKnown RBP13.8□□□□□ -0.2
LMNA-220ENST00000504687 KIAA1671Q9BY89 1806 aa13.8□□□□□ -0.2
LMNA-220ENST00000504687 ZNF638Q14966 1978 aaKnown RBP13.8□□□□□ -0.2
LMNA-220ENST00000504687 DNAH12Q6ZR08 3092 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 GOLGA6BA6NDN3 693 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 HACD1B0YJ81 288 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 AGPSO00116 658 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 DNALI1O14645 258 aaPredicted RBP13.79□□□□□ -0.2
LMNA-220ENST00000504687 IRAK2O43187 625 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 VNN2O95498 520 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 SOD2P04179 222 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 OR4Q2P0C623 313 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 RBP3P10745 1247 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 CSF2RAP15509 400 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 PECAM1P16284 738 aaPredicted RBP13.79□□□□□ -0.2
LMNA-220ENST00000504687 ITGB8P26012 769 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 ATXN1P54253 815 aaKnown RBP13.79□□□□□ -0.2
LMNA-220ENST00000504687 PLTPP55058 493 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 EIF3EP60228 445 aaKnown RBP13.79□□□□□ -0.2
LMNA-220ENST00000504687 PITX1P78337 314 aaPredicted RBP13.79□□□□□ -0.2
LMNA-220ENST00000504687 NRG1Q02297 640 aaPredicted RBP13.79□□□□□ -0.2
LMNA-220ENST00000504687 DSG1Q02413 1049 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 MMRN1Q13201 1228 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 MTA1Q13330 715 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 PPP2R5DQ14738 602 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 MORF4L2Q15014 288 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 PAFAH1B3Q15102 231 aaKnown RBP13.79□□□□□ -0.2
LMNA-220ENST00000504687 ACBD5Q5T8D3 534 aaPredicted RBP13.79□□□□□ -0.2
LMNA-220ENST00000504687 TPGS2Q68CL5 300 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 KCNT2Q6UVM3 1135 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 SCD5Q86SK9 330 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 HOOK3Q86VS8 718 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 TMEM173Q86WV6 379 aaPredicted RBP13.79□□□□□ -0.2
LMNA-220ENST00000504687 FAM131BQ86XD5 332 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 CEP57Q86XR8 500 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 SLC7A14Q8TBB6 771 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 DQX1Q8TE96 717 aaKnown RBP13.79□□□□□ -0.2
LMNA-220ENST00000504687 HAUS1Q96CS2 278 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 HAPLN3Q96S86 360 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 TTLL2Q9BWV7 592 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 TRIM31Q9BZY9 425 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 GPATCH2LQ9NWQ4 482 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 ARHGEF38Q9NXL2 777 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 SHOC2Q9UQ13 582 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 ALPK3Q96L96 1907 aa13.79□□□□□ -0.2
LMNA-220ENST00000504687 OPA1O60313 960 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms