RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 NPY4RP50391 375 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 HDAC4P56524 1084 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 NOMO3P69849 1222 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 KRT17Q04695 432 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 MGAT2Q10469 447 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 SNX1Q13596 522 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 PRICKLE4Q2TBC4 344 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 FILIP1LQ4L180 1135 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 AARDQ4LEZ3 155 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ATG14Q6ZNE5 492 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ANKRD53Q8N9V6 530 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 TMEM52Q8NDY8 209 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 OR6B3Q8NGW1 331 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 IFI44Q8TCB0 444 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 PANK1Q8TE04 598 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 EDC3Q96F86 508 aaKnown RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ZDHHC12Q96GR4 267 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 VCPIP1Q96JH7 1222 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 LINC00615Q96LM1 132 aaPredicted RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 GCOM2Q9BZD3 368 aaPredicted RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 TWSG1Q9GZX9 223 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 MUC13Q9H3R2 512 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 NCOR1P1Q9H4R4 102 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 SLC35D1Q9NTN3 355 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 PASKQ96RG2 1323 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 SOCS6O14544 535 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 HNRNPDLO14979 420 aaKnown RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 OPN1MWP04001 364 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ASGR1P07306 291 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 OPN1MW2P0DN77 364 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 OPN1MW3P0DN78 364 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 LTKP29376 864 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ETV3P41162 512 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 PAFAH1B1P43034 410 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ATXN3P54252 364 aaPredicted RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 UBE2HP62256 183 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ELP6Q0PNE2 266 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 LBRQ14739 615 aaKnown RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ZNF484Q5JVG2 852 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 DNTTIP2Q5QJE6 756 aaKnown RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 TTC38Q5R3I4 469 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 PHF19Q5T6S3 580 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 KIAA0408Q6ZU52 694 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 TAOK1Q7L7X3 1001 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 RAB11FIP2Q7L804 512 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 DPP10Q8N608 796 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 SCFD2Q8WU76 684 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 FAM216AQ8WUB2 273 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 FBLIM1Q8WUP2 373 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 GIMAP5Q96F15 307 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 PSMG3-AS1Q96PY0 264 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 PTPN18Q99952 460 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 HSD3B7Q9H2F3 369 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 GREM2Q9H772 168 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 ANO10Q9NW15 660 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 MRPL15Q9P015 296 aaKnown RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 DKK3Q9UBP4 350 aa5.51□□□□□ -1.53
NIPBL-204ENST00000504430 CFAP20Q9Y6A4 193 aaKnown RBP5.51□□□□□ -1.53
NIPBL-204ENST00000504430 CTAGE15A4D2H0 777 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 E7EVH7 732 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 H0YCG3 227 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 H7C1W4 665 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 DIRAS3O95661 229 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 CTAGE8P0CG41 777 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 PRG2P13727 222 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 NFKBIAP25963 317 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 LIPEQ05469 1076 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 HABP4Q5JVS0 413 aaKnown RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 CDPF1Q6NVV7 123 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 PET117Q6UWS5 81 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 ACAD11Q709F0 780 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 CTAGE6Q86UF2 777 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 SCN4BQ8IWT1 228 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 CTAGE4Q8IX94 777 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 ANKS4BQ8N8V4 417 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 C2CD4AQ8NCU7 369 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 SLC5A11Q8WWX8 675 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 TTC25Q96NG3 672 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 MDFIQ99750 246 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 DDX50Q9BQ39 737 aaKnown RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 HERC2P3Q9BVR0 1158 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 CNIH4Q9P003 139 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 GGA1Q9UJY5 639 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 INTS6Q9UL03 887 aaKnown RBP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 ENO4A6NNW6 628 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 GPR89AB7ZAQ6 455 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 AXIN1O15169 862 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 PGRMC2O15173 223 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 TNFSF14O43557 240 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 STAMBPO95630 424 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 GPR89BP0CG08 455 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 ACTN1P12814 892 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 SELLP14151 372 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 PDE1AP54750 535 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 HERVK_113P62684 666 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 ZBTB17Q13105 803 aa5.5□□□□□ -1.53
NIPBL-204ENST00000504430 PUM1Q14671 1186 aaKnown RBP eCLIP5.5□□□□□ -1.53
NIPBL-204ENST00000504430 GALNTL6Q49A17 601 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms