RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 UBXN10Q96LJ8 280 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 WDR24Q96S15 920 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 USP29Q9HBJ7 922 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 SNX15Q9NRS6 342 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 SAGE1Q9NXZ1 904 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 PACSIN3Q9UKS6 424 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 NFU1Q9UMS0 254 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 C19orf53Q9UNZ5 99 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 PCDHB2Q9Y5E7 798 aa5.64□□□□□ -1.51
TRAPPC13-205ENST00000504243 GRID2IPA4D2P6 1211 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 CCDC151A5D8V7 595 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 RRN3P2A6NIE6 340 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 A8MVJ9 347 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 E7EVH7 732 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 SPRY2O43597 315 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 PDE8BO95263 885 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 PYGLP06737 847 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAM163BP0C2L3 166 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 ALADP13716 330 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 ADRA1DP25100 572 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 CTGFP29279 349 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 ADD2P35612 726 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 GRIA3P42263 894 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 EEFSECP57772 596 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 TXNL4AP83876 142 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 SF3A3Q12874 501 aaKnown RBP eCLIP5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 MTAPQ13126 283 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 CBFBQ13951 182 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 CYP1B1Q16678 543 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAM153CQ494X1 144 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 PCID2Q5JVF3 399 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 GRHL2Q6ISB3 625 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 MSANTD2Q6P1R3 559 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 CYP26C1Q6V0L0 522 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 Q6YL49 198 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 SYNE3Q6ZMZ3 975 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 MMS22LQ6ZRQ5 1243 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 PIK3AP1Q6ZUJ8 805 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 PTCHD4Q6ZW05 846 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 TRABD2AQ86V40 505 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAM71DQ8N9W8 422 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 RP9Q8TA86 221 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 MCRS1Q96EZ8 462 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 PYM1Q9BRP8 204 aaKnown RBP5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 VPS16Q9H269 839 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 TOR3AQ9H497 397 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 ASAP1Q9ULH1 1129 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 CNTN6Q9UQ52 1028 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 MAST3O60307 1309 aa5.63□□□□□ -1.51
TRAPPC13-205ENST00000504243 LINC00473A8K010 186 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 TMPRSS11DO60235 418 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 ESRRBO95718 433 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 AGR2O95994 175 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 MMP8P22894 467 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 CNTFP26441 200 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 SERPINA4P29622 427 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 THBS4P35443 961 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 PLA2G5P39877 138 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 RBM5P52756 815 aaKnown RBP eCLIP5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 DEUP1Q05D60 604 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 AASDHQ4L235 1098 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 HECTD2Q5U5R9 776 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 SYT13Q7L8C5 426 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 WDR53Q7Z5U6 358 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 OVCA2Q8WZ82 227 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 LINC00476Q8WZB0 136 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 WDYHV1Q96HA8 205 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 COG8Q96MW5 612 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 EIF2AK1Q9BQI3 630 aaKnown RBP5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 CINPQ9BW66 212 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 IKZF4Q9H2S9 585 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 CHODLQ9H9P2 273 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 RIC8AQ9NPQ8 531 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 DUSP22Q9NRW4 184 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 LIN7CQ9NUP9 197 aaKnown RBP5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 SYBUQ9NX95 663 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 FEM1BQ9UK73 627 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 BAG5Q9UL15 447 aa5.62□□□□□ -1.51
TRAPPC13-205ENST00000504243 WDR27A2RRH5 827 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 B9A039 149 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 CTIFO43310 598 aaKnown RBP5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 CBFA2T3O75081 653 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 LARGE1O95461 756 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 MCM5P33992 734 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 CCT8P50990 548 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 SEC24CP53992 1094 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 ACTR2P61160 394 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 CCDC15Q0P6D6 951 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 PDCLQ13371 301 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 SLC12A1Q13621 1099 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 FBXO47Q5MNV8 452 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 NAPRTQ6XQN6 538 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 CLASRPQ8N2M8 674 aaKnown RBP5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 TMEM57Q8N5G2 664 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 BEND2Q8NDZ0 799 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 CEP70Q8NHQ1 597 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 SPPL3Q8TCT6 385 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 THAP4Q8WY91 577 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 SLC9A6Q92581 669 aa5.61□□□□□ -1.51
TRAPPC13-205ENST00000504243 FAR2Q96K12 515 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms