RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.02□□□□□ -0.48
USP46-204ENST00000503060 ZNF473Q8WTR7 871 aaKnown RBP12.02□□□□□ -0.48
USP46-204ENST00000503060 TTC25Q96NG3 672 aa12.02□□□□□ -0.48
USP46-204ENST00000503060 HNRNPABQ99729 332 aaKnown RBP12.02□□□□□ -0.48
USP46-204ENST00000503060 C11orf84Q9BUA3 381 aaPredicted RBP12.02□□□□□ -0.48
USP46-204ENST00000503060 SLC38A7Q9NVC3 462 aa12.02□□□□□ -0.48
USP46-204ENST00000503060 ABT1Q9ULW3 272 aaKnown RBP12.02□□□□□ -0.48
USP46-204ENST00000503060 GMNCA6NCL1 334 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 EBAG9O00559 213 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 XPO1O14980 1071 aaKnown RBP12.02□□□□□ -0.49
USP46-204ENST00000503060 MDM4O15151 490 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 ADAMTS4O75173 837 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 ATP2C2O75185 946 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 CHN1P15882 459 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 ZNF24P17028 368 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 TFE3P19532 575 aaPredicted RBP12.02□□□□□ -0.49
USP46-204ENST00000503060 IGFBP6P24592 240 aaPredicted RBP12.02□□□□□ -0.49
USP46-204ENST00000503060 MLH1P40692 756 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 ROR1Q01973 937 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 CA9Q16790 459 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 TMEM95Q3KNT9 176 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 CCDC38Q502W7 563 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 WSCD1Q658N2 575 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 DARS2Q6PI48 645 aaKnown RBP12.02□□□□□ -0.49
USP46-204ENST00000503060 EXOC3L1Q86VI1 746 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 VSIG1Q86XK7 387 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 PPIL6Q8IXY8 311 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 FUKQ8N0W3 1084 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 FAM71DQ8N9W8 422 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 FLCNQ8NFG4 579 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 CPT1BQ92523 772 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 CENPIQ92674 756 aaPredicted RBP12.02□□□□□ -0.49
USP46-204ENST00000503060 P3H4Q92791 437 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 XPO6Q96QU8 1125 aaKnown RBP12.02□□□□□ -0.49
USP46-204ENST00000503060 GAD1Q99259 594 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 CCDC77Q9BR77 488 aa12.02□□□□□ -0.49
USP46-204ENST00000503060 A0A087WUV0 522 aaPredicted RBP12.01□□□□□ -0.49
USP46-204ENST00000503060 STK25O00506 426 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 ALOX15BO15296 676 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 DNAJC6O75061 913 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 BPNT1O95861 308 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 FAM107AO95990 144 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 PTPN1P18031 435 aaKnown RBP12.01□□□□□ -0.49
USP46-204ENST00000503060 ACAT1P24752 427 aaKnown RBP12.01□□□□□ -0.49
USP46-204ENST00000503060 ATP5DP30049 168 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 RDXP35241 583 aaKnown RBP12.01□□□□□ -0.49
USP46-204ENST00000503060 PRKCZQ05513 592 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 CACNB2Q08289 660 aaPredicted RBP12.01□□□□□ -0.49
USP46-204ENST00000503060 INO80DQ53TQ3 878 aaPredicted RBP12.01□□□□□ -0.49
USP46-204ENST00000503060 ANKRD20A8PQ5CZ79 823 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 ERMARDQ5T6L9 678 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 ANKRD22Q5VYY1 191 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 C1orf228Q6PIY5 440 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 CENPUQ71F23 418 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 PIGZQ86VD9 579 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 PQLC3Q8N755 202 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 PLD5Q8N7P1 536 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 NAT8LQ8N9F0 302 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 ARHGEF2Q92974 986 aaKnown RBP12.01□□□□□ -0.49
USP46-204ENST00000503060 LPPQ93052 612 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 DUSP16Q9BY84 665 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 CTNNAL1Q9UBT7 734 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 LGALS13Q9UHV8 139 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 MKL2Q9ULH7 1088 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 ZNF487B1APH4 448 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 GABRDO14764 452 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 APOL1O14791 398 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 RPLP2P05387 115 aaKnown RBP12.01□□□□□ -0.49
USP46-204ENST00000503060 THP07101 528 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 TGM2P21980 687 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 FASTKD3Q14CZ7 662 aaKnown RBP12.01□□□□□ -0.49
USP46-204ENST00000503060 SLC9A4Q6AI14 798 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 ZNF449Q6P9G9 518 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 ZC3H18Q86VM9 953 aaKnown RBP12.01□□□□□ -0.49
USP46-204ENST00000503060 SLC43A3Q8NBI5 491 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 PCDH19Q8TAB3 1148 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 FAF2Q96CS3 445 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 SENP8Q96LD8 212 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 ZNF670Q9BS34 389 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 ADAM33Q9BZ11 813 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 PHACTR1Q9C0D0 580 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 XPNPEP3Q9NQH7 507 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 MIOSQ9NXC5 875 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.01□□□□□ -0.49
USP46-204ENST00000503060 CACNG4Q9UBN1 327 aa12.01□□□□□ -0.49
USP46-204ENST00000503060 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.01□□□□□ -0.49
USP46-204ENST00000503060 GOLGA8MH3BSY2 632 aa12□□□□□ -0.49
USP46-204ENST00000503060 H7C0C1 242 aa12□□□□□ -0.49
USP46-204ENST00000503060 CLDN5O00501 218 aa12□□□□□ -0.49
USP46-204ENST00000503060 GPR182O15218 404 aa12□□□□□ -0.49
USP46-204ENST00000503060 CDH16O75309 829 aa12□□□□□ -0.49
USP46-204ENST00000503060 MTRF1O75570 445 aaKnown RBP12□□□□□ -0.49
USP46-204ENST00000503060 ASGR1P07306 291 aa12□□□□□ -0.49
USP46-204ENST00000503060 HNRNPCP07910 306 aaKnown RBP eCLIP12□□□□□ -0.49
USP46-204ENST00000503060 ATP5OP48047 213 aa12□□□□□ -0.49
USP46-204ENST00000503060 AFF1P51825 1210 aaKnown RBP12□□□□□ -0.49
USP46-204ENST00000503060 ATXN1P54253 815 aaKnown RBP12□□□□□ -0.49
USP46-204ENST00000503060 SLC8A3P57103 927 aa12□□□□□ -0.49
USP46-204ENST00000503060 PDIA2Q13087 525 aaKnown RBP12□□□□□ -0.49
USP46-204ENST00000503060 EFHC1Q5JVL4 640 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 326.6 ms