RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 PPP1R2P1Q96PQ5 205 aa17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 CADM1Q9BY67 442 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 CACYBPQ9HB71 228 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 SSU72Q9NP77 194 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 RABGEF1Q9UJ41 708 aa17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 RUVBL2Q9Y230 463 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 FNDC3AQ9Y2H6 1198 aaKnown RBP17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 KDM4FA0A1W2PPD8 638 aa17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 TGFB1I1O43294 461 aa17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 ARPP19P56211 112 aa17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 ECM1Q16610 540 aa17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 ELMOD1Q8N336 334 aa17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 GMCL1P1Q8NEA9 526 aa17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 TRPC4APQ8TEL6 797 aa17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 ZCWPW1Q9H0M4 648 aa17.71■□□□□ 0.43
HMGXB3-201ENST00000502717 CCDC78A2IDD5 438 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 SPDYE5A6NIY4 337 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 CLOCKO15516 846 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 YY1P25490 414 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 HADHAP40939 763 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 HADHBP55084 474 aaKnown RBP17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 NAB1Q13506 487 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 BAATQ14032 418 aaPredicted RBP17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 CCDC60Q8IWA6 550 aaPredicted RBP17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 MAP3K6O95382 1288 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 ACADSBP45954 432 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 EFL1Q7Z2Z2 1120 aaKnown RBP17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 TDRPQ86YL5 185 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 EMC1Q8N766 993 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 PLEKHA5Q9HAU0 1116 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 ACP6Q9NPH0 428 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 COG5Q9UP83 839 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 ABCC6O95255 1503 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 CHADO15335 359 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 LINC00523Q86TU6 105 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 EGFL6Q8IUX8 553 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 SGF29Q96ES7 293 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 RPAP3Q9H6T3 665 aaPredicted RBP17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 C15orf38-AP3S2A0A0A6YYH1 394 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 DPYSL4O14531 572 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 PEX11AO75192 247 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 CYP3A4P08684 503 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 CYP2C8P10632 490 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 RBBP7Q16576 425 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 ARSHQ5FYA8 562 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 GRTP1Q5TC63 336 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 LRP10Q7Z4F1 713 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 ARPINQ7Z6K5 226 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 DHFR2Q86XF0 187 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 GSTCDQ8NEC7 633 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 SPOCK2Q92563 424 aa17.7■□□□□ 0.42
HMGXB3-201ENST00000502717 CFAP99D6REC4 459 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 TOMM70O94826 608 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 COX4I1P13073 169 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 TMEM132DQ14C87 1099 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 VSTM1Q6UX27 236 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 RNF148Q8N7C7 305 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 BHLHE22Q8NFJ8 381 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 ULK4Q96C45 1275 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 NMUR2Q9GZQ4 415 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 PIDD1Q9HB75 910 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 SLC17A7Q9P2U7 560 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 KIAA1257Q9ULG3 409 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 CLASP2O75122 1294 aaKnown RBP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 RPL22P35268 128 aaKnown RBP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 GMPSP49915 693 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 AGKQ53H12 422 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 C6orf10Q5SRN2 563 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 AGAP9Q5VTM2 703 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 ANO7Q6IWH7 933 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 TAF2Q6P1X5 1199 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 ANKRD13AQ8IZ07 590 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 ZNF668Q96K58 619 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 LRRC42Q9Y546 428 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 AP4B1Q9Y6B7 739 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 C19orf81C9J6K1 198 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 F8VP50 259 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 DLGAP3O95886 979 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 VDRP11473 427 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 DSTYKQ6XUX3 929 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 RBM15BQ8NDT2 890 aaKnown RBP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 SPIRE2Q8WWL2 714 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 FHDC1Q9C0D6 1143 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 BRD8Q9H0E9 1235 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 LNPEPQ9UIQ6 1025 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 ACOT9Q9Y305 439 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 SNX9Q9Y5X1 595 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 UBDO15205 165 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 TCEA3O75764 348 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 ASMTLO95671 621 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 ACAT1P24752 427 aaKnown RBP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 PSEN1P49768 467 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 MPP3Q13368 585 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 NFIL3Q16649 462 aa17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 ANGEL2Q5VTE6 544 aaKnown RBP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 ZNF513Q8N8E2 541 aaPredicted RBP17.69■□□□□ 0.42
HMGXB3-201ENST00000502717 URGCPQ8TCY9 931 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms