RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 BEND5Q7L4P6 421 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 XYLT1Q86Y38 959 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 DEFB106AQ8N104 65 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 C11orf70Q9BRQ4 267 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 DCLK3Q9C098 648 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 NUCKS1Q9H1E3 243 aaKnown RBP17.5■□□□□ 0.39
PRKCB-210ENST00000498739 HAUS4Q9H6D7 363 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 LTB4R2Q9NPC1 389 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 CAPN11Q9UMQ6 739 aa17.5■□□□□ 0.39
PRKCB-210ENST00000498739 NDRG2Q9UN36 371 aaKnown RBP17.5■□□□□ 0.39
PRKCB-210ENST00000498739 MRPS17Q9Y2R5 130 aaKnown RBP17.5■□□□□ 0.39
PRKCB-210ENST00000498739 LUC7L2Q9Y383 392 aaKnown RBP17.5■□□□□ 0.39
PRKCB-210ENST00000498739 GOLGA8SH3BPF8 625 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 AP5Z1O43299 807 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 KLKB1P03952 638 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 SKILP12757 684 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 AOC1P19801 751 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 TARSP26639 723 aaKnown RBP17.49■□□□□ 0.39
PRKCB-210ENST00000498739 CASP14P31944 242 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 GJA4P35212 333 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 CLCN5P51795 746 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 VCPP55072 806 aaKnown RBP17.49■□□□□ 0.39
PRKCB-210ENST00000498739 ZBED6P86452 979 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 AMPD2Q01433 879 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 CENPCQ03188 943 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 DHCR24Q15392 516 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 TRIP4Q15650 581 aaPredicted RBP17.49■□□□□ 0.39
PRKCB-210ENST00000498739 DCAF6Q58WW2 860 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 FAM102AQ5T9C2 384 aaPredicted RBP17.49■□□□□ 0.39
PRKCB-210ENST00000498739 C1orf228Q6PIY5 440 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 TXNDC11Q6PKC3 985 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 SARM1Q6SZW1 724 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 Q6ZNB5 142 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 SLC26A9Q7LBE3 791 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 DENND1CQ8IV53 801 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 VSTM4Q8IW00 320 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 PJA1Q8NG27 643 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 ADAM32Q8TC27 787 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 SERPINB11Q96P15 392 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 TRIM5Q9C035 493 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 SIT1Q9Y3P8 196 aa17.49■□□□□ 0.39
PRKCB-210ENST00000498739 FAM170BA6NMN3 283 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 PI15O43692 258 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 DAB1O75553 588 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 ADH1CP00326 375 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 MMP8P22894 467 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 PRKCIP41743 596 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 HARS2P49590 506 aaKnown RBP17.48■□□□□ 0.39
PRKCB-210ENST00000498739 TBX4P57082 545 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 RNASE9P60153 205 aaKnown RBP17.48■□□□□ 0.39
PRKCB-210ENST00000498739 TRIM14Q14142 442 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 PON2Q15165 354 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 TDRD12Q587J7 1177 aaKnown RBP17.48■□□□□ 0.39
PRKCB-210ENST00000498739 LY6G5CQ5SRR4 150 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 RHBDF2Q6PJF5 856 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 TAC4Q86UU9 113 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 CHFRQ96EP1 664 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 SLC2A13Q96QE2 648 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 NELL2Q99435 816 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 SYT11Q9BT88 431 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 ANP32EQ9BTT0 268 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 AGO1Q9UL18 857 aaKnown RBP17.48■□□□□ 0.39
PRKCB-210ENST00000498739 ZNF510Q9Y2H8 683 aa17.48■□□□□ 0.39
PRKCB-210ENST00000498739 MTF2Q9Y483 593 aaPredicted RBP17.48■□□□□ 0.39
PRKCB-210ENST00000498739 TRUB2O95900 331 aaKnown RBP17.47■□□□□ 0.39
PRKCB-210ENST00000498739 DCNP07585 359 aaKnown RBP17.47■□□□□ 0.39
PRKCB-210ENST00000498739 ADH5P11766 374 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 AVPR2P30518 371 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 SCNN1AP37088 669 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 PITX1P78337 314 aaPredicted RBP17.47■□□□□ 0.39
PRKCB-210ENST00000498739 CDK17Q00537 523 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 GAD2Q05329 585 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 ANO4Q32M45 955 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 ZNF571Q7Z3V5 609 aaPredicted RBP17.47■□□□□ 0.39
PRKCB-210ENST00000498739 PHLDB2Q86SQ0 1253 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 CCDC105Q8IYK2 499 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 TMEM105Q8N8V8 129 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 SYN2Q92777 582 aaPredicted RBP17.47■□□□□ 0.39
PRKCB-210ENST00000498739 FAM204AQ9H8W3 233 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 SPHK2Q9NRA0 654 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 ADAM22Q9P0K1 906 aa17.47■□□□□ 0.39
PRKCB-210ENST00000498739 CUL9Q8IWT3 2517 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 SYNJ2BP-COX16A0A087WUM0 186 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 TMCO5BA8MYB1 307 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 NCAM2O15394 837 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 IRAK2O43187 625 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 IGLV3-27P01718 113 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 CALB1P05937 261 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 TPM1P09493 284 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 NOS2P35228 1153 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 RING1Q06587 406 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 PTP4A2Q12974 167 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 NNTQ13423 1086 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 NAIF1Q69YI7 327 aaPredicted RBP17.46■□□□□ 0.39
PRKCB-210ENST00000498739 ACAD10Q6JQN1 1059 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 TPGS1Q6ZTW0 290 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 TMEM25Q86YD3 366 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 PHF13Q86YI8 300 aaPredicted RBP17.46■□□□□ 0.39
PRKCB-210ENST00000498739 UNC45BQ8IWX7 931 aa17.46■□□□□ 0.39
PRKCB-210ENST00000498739 OLIG1Q8TAK6 271 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms