RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 SERPINA4P29622 427 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 UQCRC1P31930 480 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 MAGEA10P43363 369 aaPredicted RBP6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 LINC00310P59036 64 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 FOXL1Q12952 345 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 PDCLQ13371 301 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 CCNIQ14094 377 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 GALNTL6Q49A17 601 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 CLEC9AQ6UXN8 241 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 D2HGDHQ8N465 521 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 TSPYL6Q8N831 410 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 MCRS1Q96EZ8 462 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 CHCHD6Q9BRQ6 235 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 RNPEPQ9H4A4 650 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 UNKLQ9H9P5 680 aaKnown RBP6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 SERTAD3Q9UJW9 196 aa6.88□□□□□ -1.31
PAXBP1-209ENST00000497873 STRCP1A6NGW2 1772 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 F5H697 171 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 STX16-NPEPL1H3BU86 382 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 STX16O14662 325 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 GFPT2O94808 682 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 GATMP50440 423 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 CASP6P55212 293 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 SMAD1Q15797 465 aaKnown RBP6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 P3H1Q32P28 736 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 CD300EQ496F6 205 aaPredicted RBP6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 CERCAMQ5T4B2 595 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 BBS12Q6ZW61 710 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 TMPRSS9Q7Z410 1059 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 C11orf44Q8N8P7 122 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 MBD3L2Q8NHZ7 208 aaPredicted RBP6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 ZDHHC12Q96GR4 267 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 REEP2Q9BRK0 252 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 MECRQ9BV79 373 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 CD320Q9NPF0 282 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 CLIC5Q9NZA1 410 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 DNAJC16Q9Y2G8 782 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 PTPRUQ92729 1446 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 EFCAB8A8MWE9 144 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 FIBPO43427 364 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 ZNF500O60304 480 aaPredicted RBP6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 GPANK1O95872 356 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 APOBEC3AP31941 199 aaPredicted RBP6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 NDUFV1P49821 464 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 NT5DC1Q5TFE4 455 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 C1QL3Q5VWW1 255 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 ATG16L1Q676U5 607 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 FOXR2Q6PJQ5 311 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 C16orf54Q6UWD8 224 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 PLEKHH3Q7Z736 793 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 FSTL5Q8N475 847 aaPredicted RBP6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 CENPIQ92674 756 aaPredicted RBP6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 FAM84AQ96KN4 292 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 MEGF9Q9H1U4 602 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 NDUFAF4Q9P032 175 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 SSX2IPQ9Y2D8 614 aa6.87□□□□□ -1.31
PAXBP1-209ENST00000497873 CDC42BPGQ6DT37 1551 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 CHD2O14647 1828 aaKnown RBP6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 A0A1W2PPH5 198 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 TAL1P17542 331 aaPredicted RBP6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 RNASE9P60153 205 aaKnown RBP6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 CPSF1Q10570 1443 aaKnown RBP6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 CSHL1Q14406 222 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 NWD1Q149M9 1564 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 PREPLQ4J6C6 727 aaPredicted RBP6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 RBM20Q5T481 1227 aaKnown RBP6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 DEPDC1Q5TB30 811 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 ITPRIPL1Q6GPH6 555 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 SPOCD1Q6ZMY3 1216 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 LGI4Q8N135 537 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 TMTC2Q8N394 836 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 TOPAZ1Q8N9V7 1692 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 Q8NA96 180 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 PRAM1Q96QH2 718 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 TTPALQ9BTX7 342 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 CD163L1Q9NR16 1453 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 ANKRD26Q9UPS8 1709 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 SLC27A6Q9Y2P4 619 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 KNSTRNQ9Y448 316 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 SNX14Q9Y5W7 946 aa6.86□□□□□ -1.31
PAXBP1-209ENST00000497873 CCDC196A0A1B0GTZ2 297 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 DDX58O95786 925 aaKnown RBP6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 ANXA11P50995 505 aaKnown RBP6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 OCA2Q04671 838 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 KRT32Q14532 448 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 ANKRD1Q15327 319 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 HAUS3Q68CZ6 603 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 CLNKQ7Z7G1 428 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 GSPT2Q8IYD1 628 aaKnown RBP6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 SUN3Q8TAQ9 357 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 ATRIPQ8WXE1 791 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 RFFLQ8WZ73 363 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 MIEF2Q96C03 454 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 NUDT22Q9BRQ3 303 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 ABHD16BQ9H3Z7 469 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 SORCS3Q9UPU3 1222 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 LTBP4Q8N2S1 1624 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 E7ENX8 843 aa6.85□□□□□ -1.31
PAXBP1-209ENST00000497873 ZFPL1O95159 310 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms