RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 PAXBP1Q9Y5B6 917 aa20.32■□□□□ 0.84
ATG3-208ENST00000495756 COL6A3P12111 3177 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 USP27XA6NNY8 438 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 M0QYT0 321 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 CCP110O43303 1012 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 IGLV3-25P01717 112 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 ATP11AP98196 1134 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 PIGHQ14442 188 aaPredicted RBP20.31■□□□□ 0.84
ATG3-208ENST00000495756 CBX2Q14781 532 aaPredicted RBP20.31■□□□□ 0.84
ATG3-208ENST00000495756 GET4Q7L5D6 327 aaPredicted RBP20.31■□□□□ 0.84
ATG3-208ENST00000495756 BNIPLQ7Z465 357 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 MIB1Q86YT6 1006 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 NPAS3Q8IXF0 933 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 MAFAQ8NHW3 353 aaPredicted RBP20.31■□□□□ 0.84
ATG3-208ENST00000495756 TPCN2Q8NHX9 752 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 CENPIQ92674 756 aaPredicted RBP20.31■□□□□ 0.84
ATG3-208ENST00000495756 SLITRK6Q9H5Y7 841 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 KCND1Q9NSA2 647 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.31■□□□□ 0.84
ATG3-208ENST00000495756 CALCOCO1Q9P1Z2 691 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 RASAL2Q9UJF2 1139 aa20.31■□□□□ 0.84
ATG3-208ENST00000495756 GRXCR2A6NFK2 248 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 BUB1BO60566 1050 aaPredicted RBP20.3■□□□□ 0.84
ATG3-208ENST00000495756 PROSCO94903 275 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 CKMP06732 381 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 SMAD4Q13485 552 aaKnown RBP20.3■□□□□ 0.84
ATG3-208ENST00000495756 MESDQ14696 234 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 IFI16Q16666 785 aaKnown RBP20.3■□□□□ 0.84
ATG3-208ENST00000495756 CDO1Q16878 200 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 SH3PXD2AQ5TCZ1 1133 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 POTEHQ6S545 545 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 STRADAQ7RTN6 431 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 NIPA2Q8N8Q9 360 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 FAM172AQ8WUF8 416 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 FGF13Q92913 245 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 PGAP3Q96FM1 320 aaPredicted RBP20.3■□□□□ 0.84
ATG3-208ENST00000495756 ZSWIM3Q96MP5 696 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 POMKQ9H5K3 350 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 DDIT4Q9NX09 232 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 DENND4AQ7Z401 1863 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 MSI1O43347 362 aaKnown RBP20.3■□□□□ 0.84
ATG3-208ENST00000495756 ENDOD1O94919 500 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 MOCS3O95396 460 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 MBL2P11226 248 aaPredicted RBP20.3■□□□□ 0.84
ATG3-208ENST00000495756 DESP17661 470 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 GBP1P32455 592 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 SLC7A9P82251 487 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 NME3Q13232 169 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 EIF4EBP2Q13542 120 aaPredicted RBP20.3■□□□□ 0.84
ATG3-208ENST00000495756 ACAP1Q15027 740 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 CMTM8Q8IZV2 173 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 SERPINB11Q96P15 392 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.3■□□□□ 0.84
ATG3-208ENST00000495756 GDE1Q9NZC3 331 aa20.3■□□□□ 0.84
ATG3-208ENST00000495756 SYNJ2BP-COX16A0A087WUM0 186 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 GOLGA6L9A6NEM1 432 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 TMEM110-MUSTN1A8MSY1 372 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 IRAK2O43187 625 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 MBTPS2O43462 519 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 F9P00740 461 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 AVPR1AP37288 418 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 HDAC4P56524 1084 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 DEUP1Q05D60 604 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 NNTQ13423 1086 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 RAB6CQ53S08 254 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 C11orf63Q6NUN7 778 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 C17orf53Q8N3J3 647 aaPredicted RBP20.29■□□□□ 0.84
ATG3-208ENST00000495756 KLF16Q9BXK1 252 aaPredicted RBP20.29■□□□□ 0.84
ATG3-208ENST00000495756 RAB6CQ9H0N0 254 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 PIGVQ9NUD9 493 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 COX16Q9P0S2 106 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 CDH7Q9ULB5 785 aa20.29■□□□□ 0.84
ATG3-208ENST00000495756 UNC80Q8N2C7 3258 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 SLC12A8A0AV02 714 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 GRID2IPA4D2P6 1211 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 RNF8O76064 485 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 MAN1A1P33908 653 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 RDXP35241 583 aaKnown RBP20.28■□□□□ 0.84
ATG3-208ENST00000495756 KPNA1P52294 538 aaPredicted RBP20.28■□□□□ 0.84
ATG3-208ENST00000495756 TRIP4Q15650 581 aaPredicted RBP20.28■□□□□ 0.84
ATG3-208ENST00000495756 LEXMQ3ZCV2 418 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 ARFGAP1Q8N6T3 406 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.28■□□□□ 0.84
ATG3-208ENST00000495756 ZSCAN18Q8TBC5 510 aaPredicted RBP20.28■□□□□ 0.84
ATG3-208ENST00000495756 ZFRQ96KR1 1074 aaKnown RBP20.28■□□□□ 0.84
ATG3-208ENST00000495756 SMPD4Q9NXE4 827 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 ARHGAP26Q9UNA1 814 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 USTQ9Y2C2 406 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 TLR6Q9Y2C9 796 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 HBS1LQ9Y450 684 aaKnown RBP20.28■□□□□ 0.84
ATG3-208ENST00000495756 CPQQ9Y646 472 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 CAPN6Q9Y6Q1 641 aa20.28■□□□□ 0.84
ATG3-208ENST00000495756 LRCH4O75427 683 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 WEE1P30291 646 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 CXCR3P49682 368 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 ATXN1P54253 815 aaKnown RBP20.27■□□□□ 0.84
ATG3-208ENST00000495756 TBX4P57082 545 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 COG7P83436 770 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 DAB2IPQ5VWQ8 1189 aa20.27■□□□□ 0.84
ATG3-208ENST00000495756 DAAM2Q86T65 1068 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms