RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.02□□□□□ -0.33
TRA2A-209ENST00000494255 LINC00597Q9H2U6 94 aa13.02□□□□□ -0.33
TRA2A-209ENST00000494255 C8orf33Q9H7E9 229 aaPredicted RBP13.02□□□□□ -0.33
TRA2A-209ENST00000494255 HPS4Q9NQG7 708 aa13.02□□□□□ -0.33
TRA2A-209ENST00000494255 GTSE1Q9NYZ3 720 aa13.02□□□□□ -0.33
TRA2A-209ENST00000494255 ZNF510Q9Y2H8 683 aa13.02□□□□□ -0.33
TRA2A-209ENST00000494255 PIAS3Q9Y6X2 628 aa13.02□□□□□ -0.33
TRA2A-209ENST00000494255 MSI1O43347 362 aaKnown RBP13.01□□□□□ -0.33
TRA2A-209ENST00000494255 CORO1AP31146 461 aaKnown RBP13.01□□□□□ -0.33
TRA2A-209ENST00000494255 HNRNPH3P31942 346 aaKnown RBP13.01□□□□□ -0.33
TRA2A-209ENST00000494255 TBX4P57082 545 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 AMPD2Q01433 879 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 C1QBPQ07021 282 aaKnown RBP13.01□□□□□ -0.33
TRA2A-209ENST00000494255 NNTQ13423 1086 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 HGSNATQ68CP4 663 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 MON1BQ7L1V2 547 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 BBS7Q8IWZ6 715 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 DRC7Q8IY82 874 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 TTC8Q8TAM2 541 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 WBP2Q969T9 261 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 MSANTD3Q96H12 275 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 DNAJC7Q99615 494 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 ECT2Q9H8V3 914 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 RRN3Q9NYV6 651 aa13.01□□□□□ -0.33
TRA2A-209ENST00000494255 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.01□□□□□ -0.334e-10■□□□□ 10.1
TRA2A-209ENST00000494255 COL4A2P08572 1712 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 KRBA1A5PL33 1030 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 FAM86C2PA6NEL3 165 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 TMCO5BA8MYB1 307 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 AKR1B15C9JRZ8 316 aaPredicted RBP13□□□□□ -0.33
TRA2A-209ENST00000494255 DDX3XO00571 662 aaKnown RBP eCLIP13□□□□□ -0.334e-21■■■■■ 31.7
TRA2A-209ENST00000494255 MAN2B1O00754 1011 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 MFAP3LO75121 409 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 ADH1CP00326 375 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 GZMAP12544 262 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 GBP1P32455 592 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 NOS2P35228 1153 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 MATKP42679 507 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 MLLT6P55198 1093 aaPredicted RBP13□□□□□ -0.33
TRA2A-209ENST00000494255 ADKP55263 362 aaKnown RBP13□□□□□ -0.33
TRA2A-209ENST00000494255 TBX2Q13207 712 aaPredicted RBP13□□□□□ -0.33
TRA2A-209ENST00000494255 C1orf228Q6PIY5 440 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 ZNF852Q6ZMS4 543 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 Q6ZNB5 142 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 TAC4Q86UU9 113 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 RALGPS2Q86X27 583 aaPredicted RBP13□□□□□ -0.33
TRA2A-209ENST00000494255 UNC45BQ8IWX7 931 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 ADAM32Q8TC27 787 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 PBXIP1Q96AQ6 731 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 FAM204AQ9H8W3 233 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 TBC1D17Q9HA65 648 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 METTL5Q9NRN9 209 aaKnown RBP13□□□□□ -0.33
TRA2A-209ENST00000494255 ABHD10Q9NUJ1 306 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 STAP1Q9ULZ2 295 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 TLR6Q9Y2C9 796 aa13□□□□□ -0.33
TRA2A-209ENST00000494255 MRPS17Q9Y2R5 130 aaKnown RBP13□□□□□ -0.33
TRA2A-209ENST00000494255 SPECC1L-ADORA2AF8WAN1 911 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 GREM1O60565 184 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 TRUB2O95900 331 aaKnown RBP12.99□□□□□ -0.33
TRA2A-209ENST00000494255 GSCP56915 257 aaPredicted RBP12.99□□□□□ -0.33
TRA2A-209ENST00000494255 STARD6P59095 220 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 RING1Q06587 406 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 PTP4A2Q12974 167 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 DHCR24Q15392 516 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 TMEM31Q5JXX7 168 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 IER5LQ5T953 404 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 NUGGCQ68CJ6 796 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 PHLDB2Q86SQ0 1253 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 DENND1CQ8IV53 801 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 MCOLN2Q8IZK6 566 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 ADGRG2Q8IZP9 1017 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 FLCNQ8NFG4 579 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 EXOC4Q96A65 974 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 VCPIP1Q96JH7 1222 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 SELENOOQ9BVL4 669 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 TAS2R14Q9NYV8 317 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 ADAMTS1Q9UHI8 967 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 TECTAO75443 2155 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 SYNJ2BP-COX16A0A087WUM0 186 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 ANKRD62A6NC57 917 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 IRAK2O43187 625 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 GPR37L1O60883 481 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 RTN2O75298 545 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 IGLV3-27P01718 113 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 APOEP02649 317 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 FTLP02792 175 aaPredicted RBP12.99□□□□□ -0.33
TRA2A-209ENST00000494255 KLKB1P03952 638 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 CYP17A1P05093 508 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 PLEKP08567 350 aaPredicted RBP12.99□□□□□ -0.33
TRA2A-209ENST00000494255 SLC2A3P11169 496 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 ADH5P11766 374 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 KRT3P12035 628 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 CTHP32929 405 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 CHKAP35790 457 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 SOX9P48436 509 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 SLC11A2P49281 568 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 ARID5BQ14865 1188 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 DNAJC24Q6P3W2 148 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 ARCQ7LC44 396 aa12.99□□□□□ -0.33
TRA2A-209ENST00000494255 BMP8AQ7Z5Y6 402 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms