RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 MORN1Q5T089 497 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 ARMC3Q5W041 872 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 ARHGAP17Q68EM7 881 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 PDZD4Q76G19 769 aaPredicted RBP11.9□□□□□ -0.5
RFC4-214ENST00000494047 NET1Q7Z628 596 aaPredicted RBP11.9□□□□□ -0.5
RFC4-214ENST00000494047 MTDHQ86UE4 582 aaKnown RBP11.9□□□□□ -0.5
RFC4-214ENST00000494047 LCA5Q86VQ0 697 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 NCAPG2Q86XI2 1143 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 ANKLE1Q8NAG6 615 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 JOSD2Q8TAC2 188 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 DNAJC9Q8WXX5 260 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 JADE3Q92613 823 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 EMID1Q96A84 441 aaPredicted RBP11.9□□□□□ -0.5
RFC4-214ENST00000494047 TTC17Q96AE7 1141 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 E2F7Q96AV8 911 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 PTCD3Q96EY7 689 aaKnown RBP11.9□□□□□ -0.5
RFC4-214ENST00000494047 HEXIM2Q96MH2 286 aaKnown RBP11.9□□□□□ -0.5
RFC4-214ENST00000494047 SPATA33Q96N06 139 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 SRPK1Q96SB4 655 aaKnown RBP11.9□□□□□ -0.5
RFC4-214ENST00000494047 TMEM120AQ9BXJ8 343 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 RNF208Q9H0X6 261 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 GPAMQ9HCL2 828 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 RAB6BQ9NRW1 208 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 ETNK2Q9NVF9 386 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 THAP1Q9NVV9 213 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 STX18Q9P2W9 335 aaKnown RBP11.9□□□□□ -0.5
RFC4-214ENST00000494047 GRID1Q9ULK0 1009 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 L3MBTL1Q9Y468 752 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 CENPFP49454 3210 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 A0A0G2JND7 137 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 A0A1W2PPM1 405 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 FAM170AA1A519 330 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 FAM159BA6NKW6 160 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 GOLGA8MH3BSY2 632 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 KCNN4O15554 427 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 OPHN1O60890 802 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 FKBP6O75344 327 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 KLHL2O95198 593 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 CALCAP01258 141 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 ITGB3P05106 788 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 INHAP05111 366 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 EDN1P05305 212 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 SERPINA6P08185 405 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 DLDP09622 509 aaKnown RBP11.89□□□□□ -0.51
RFC4-214ENST00000494047 T-ENOLP0DO92 83 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 ETS1P14921 441 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 TCF4P15884 667 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 GJA8P48165 433 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 CDK7P50613 346 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 GDF10P55107 478 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 RPL26P61254 145 aaKnown RBP11.89□□□□□ -0.51
RFC4-214ENST00000494047 YWHAZP63104 245 aaKnown RBP11.89□□□□□ -0.51
RFC4-214ENST00000494047 XIAPP98170 497 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 SLC6A3Q01959 620 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 PPARDQ03181 441 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 ADCY1Q08828 1119 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 ILF2Q12905 390 aaKnown RBP11.89□□□□□ -0.51
RFC4-214ENST00000494047 SEMA5AQ13591 1074 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 GRB14Q14449 540 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 KPNB1Q14974 876 aaKnown RBP11.89□□□□□ -0.51
RFC4-214ENST00000494047 MAP3K21Q5TCX8 1036 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 ANKRD22Q5VYY1 191 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 HEATR6Q6AI08 1181 aaKnown RBP11.89□□□□□ -0.51
RFC4-214ENST00000494047 OR6B2Q6IFH4 312 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 CAPRIN2Q6IMN6 1127 aaKnown RBP11.89□□□□□ -0.51
RFC4-214ENST00000494047 EFCAB12Q6NXP0 572 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 MARK2Q7KZI7 788 aaKnown RBP11.89□□□□□ -0.51
RFC4-214ENST00000494047 STRADAQ7RTN6 431 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 TMEM110Q86TL2 294 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 UNC45BQ8IWX7 931 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 ZNF276Q8N554 614 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 PLD5Q8N7P1 536 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 RXFP2Q8WXD0 754 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 UTP4Q969X6 686 aaKnown RBP11.89□□□□□ -0.51
RFC4-214ENST00000494047 NLRP4Q96MN2 994 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 ACAP3Q96P50 834 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 QKIQ96PU8 341 aaKnown RBP eCLIP11.89□□□□□ -0.51
RFC4-214ENST00000494047 APBA2Q99767 749 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 EBNA1BP2Q99848 306 aaKnown RBP11.89□□□□□ -0.51
RFC4-214ENST00000494047 SLC4A5Q9BY07 1137 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 BRD8Q9H0E9 1235 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 KIF9Q9HAQ2 790 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 POPDC2Q9HBU9 364 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 SPATS2LQ9NUQ6 558 aaKnown RBP11.89□□□□□ -0.51
RFC4-214ENST00000494047 HEY2Q9UBP5 337 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 DCDC2Q9UHG0 476 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 GGT7Q9UJ14 662 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 ADAM28Q9UKQ2 775 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 SUFUQ9UMX1 484 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 PCDHA11Q9Y5I1 949 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 PLXNB2O15031 1838 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 CITO14578 2027 aa11.89□□□□□ -0.51
RFC4-214ENST00000494047 SOWAHBA6NEL2 793 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 ERI2A8K979 691 aaKnown RBP11.88□□□□□ -0.51
RFC4-214ENST00000494047 ZBTB42B2RXF5 422 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 TRIM49D1C9J1S8 452 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 SPECC1L-ADORA2AF8WAN1 911 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 NVLO15381 856 aaKnown RBP11.88□□□□□ -0.51
RFC4-214ENST00000494047 MTSS1O43312 755 aa11.88□□□□□ -0.51
RFC4-214ENST00000494047 RPSAP08865 295 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms