RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PYGMP11217 842 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 PRKACAP17612 351 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 DPYDQ12882 1025 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 ALCAMQ13740 583 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 SQLEQ14534 574 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 MYLK3Q32MK0 819 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 SEZ6Q53EL9 994 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 OR52E8Q6IFG1 317 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 METTL3Q86U44 580 aaKnown RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 THNSL1Q8IYQ7 743 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 CMTR2Q8IYT2 770 aaKnown RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 SP7Q8TDD2 431 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 ARNTL2Q8WYA1 636 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 CCDC127Q96BQ5 260 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 ACCSQ96QU6 501 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 C17orf80Q9BSJ5 609 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 TTYH1Q9H313 450 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 ST6GALNAC4Q9H4F1 302 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 PPCSQ9HAB8 311 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 SAMSN1Q9NSI8 373 aaKnown RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 ARHGEF38Q9NXL2 777 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 KLK14Q9P0G3 267 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 LRRC42Q9Y546 428 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 MRPL42Q9Y6G3 142 aaKnown RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 TMEM114B3SHH9 223 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 HDAC3O15379 428 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 KLRC4O43908 158 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 RECQL4O94761 1208 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 URI1O94763 535 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 LMNAP02545 664 aaKnown RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 CTNNB1P35222 781 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 PPP2R2AP63151 447 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 RNASELQ05823 741 aaKnown RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 ANKRD20A2Q5SQ80 823 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 ANKRD20A1Q5TYW2 823 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 ANKRD20A3Q5VUR7 823 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 ABRAXAS1Q6UWZ7 409 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 NELFCDQ8IXH7 590 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 DEFB123Q8N688 67 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 URGCPQ8TCY9 931 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 NOC3LQ8WTT2 800 aaKnown RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 ABTB1Q969K4 478 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 NXPE3Q969Y0 559 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 ZFP42Q96MM3 310 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 CASD1Q96PB1 797 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 TGS1Q96RS0 853 aaKnown RBP12.03□□□□□ -0.48
BRCA1-222ENST00000493919 GAD1Q99259 594 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 PTPRHQ9HD43 1115 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 IMPACTQ9P2X3 320 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 SCOCQ9UIL1 159 aa12.03□□□□□ -0.48
BRCA1-222ENST00000493919 COL6A3P12111 3177 aa12.02□□□□□ -0.48
BRCA1-222ENST00000493919 COL4A4P53420 1690 aaPredicted RBP12.02□□□□□ -0.48
BRCA1-222ENST00000493919 KATNA1O75449 491 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 POMCP01189 267 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 GSTA1P08263 222 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 MCF2P10911 925 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 PROZP22891 400 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 SCNN1GP51170 649 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 ALDH18A1P54886 795 aaKnown RBP12.02□□□□□ -0.49
BRCA1-222ENST00000493919 PLCB3Q01970 1234 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 EHHADHQ08426 723 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 DNAJC3Q13217 504 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 ANKRD20A8PQ5CZ79 823 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 NOMO2Q5JPE7 1267 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 C6orf183Q5T699 404 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 SLC39A4Q6P5W5 647 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 ANGPTL8Q6UXH0 198 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 FAM149B1Q96BN6 582 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 FERD3LQ96RJ6 166 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 MSTO1Q9BUK6 570 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 KCTD10Q9H3F6 313 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 SLC39A1Q9NY26 324 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 REV3LO60673 3130 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 RALGAPA2Q2PPJ7 1873 aa12.02□□□□□ -0.49
BRCA1-222ENST00000493919 TMEM265A0A087WTH1 108 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 A0A088AWK7 358 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 ARL5CA6NH57 179 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 GOLGA8JA6NMD2 632 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 SYCE1LA8MT33 242 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 ANKRD63C9JTQ0 380 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 EIF3DO15371 548 aaKnown RBP eCLIP12.01□□□□□ -0.49
BRCA1-222ENST00000493919 FGF18O76093 207 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 ECDO95905 644 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-222ENST00000493919 PIGRP01833 764 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 KRT6AP02538 564 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 KRT6BP04259 564 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 ATP6V1C1P21283 382 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 PBX3P40426 434 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 ASMTP46597 345 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 AFF1P51825 1210 aaKnown RBP12.01□□□□□ -0.49
BRCA1-222ENST00000493919 YARSP54577 528 aaKnown RBP12.01□□□□□ -0.49
BRCA1-222ENST00000493919 TJAP1Q5JTD0 557 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 CYP4A22Q5TCH4 519 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 METTL21CQ5VZV1 264 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 TMEM192Q8IY95 271 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 KIAA0895Q8NCT3 520 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 POMGNT1Q8WZA1 660 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 SYT15Q9BQS2 421 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 STRA6Q9BX79 667 aa12.01□□□□□ -0.49
BRCA1-222ENST00000493919 HAPLN2Q9GZV7 340 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms