RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 NEDD8-MDP1E9PL57 170 aa23.65■■□□□ 1.38
SNIP1-203ENST00000493916 CHRM1P11229 460 aaPredicted RBP23.65■■□□□ 1.38
SNIP1-203ENST00000493916 TYRP14679 529 aa23.65■■□□□ 1.38
SNIP1-203ENST00000493916 CLCN1P35523 988 aa23.65■■□□□ 1.38
SNIP1-203ENST00000493916 KDSRQ06136 332 aa23.65■■□□□ 1.38
SNIP1-203ENST00000493916 TMEM110Q86TL2 294 aa23.65■■□□□ 1.38
SNIP1-203ENST00000493916 LONP2Q86WA8 852 aa23.65■■□□□ 1.38
SNIP1-203ENST00000493916 MIS12Q9H081 205 aa23.65■■□□□ 1.38
SNIP1-203ENST00000493916 VPS16Q9H269 839 aa23.65■■□□□ 1.38
SNIP1-203ENST00000493916 DEC1Q9P2X7 70 aa23.65■■□□□ 1.38
SNIP1-203ENST00000493916 SLC8A2Q9UPR5 921 aa23.65■■□□□ 1.38
SNIP1-203ENST00000493916 PNMA6AP0CW24 399 aaPredicted RBP23.64■■□□□ 1.37
SNIP1-203ENST00000493916 UCHL3P15374 230 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 CHKAP35790 457 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 TNFRSF4P43489 277 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 BPIFB4P59827 614 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 MRPS21P82921 87 aaKnown RBP23.64■■□□□ 1.37
SNIP1-203ENST00000493916 DMWDQ09019 674 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 PDCLQ13371 301 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 RAPGEF1Q13905 1077 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 DRAP1Q14919 205 aaPredicted RBP23.64■■□□□ 1.37
SNIP1-203ENST00000493916 TPGS1Q6ZTW0 290 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 BEND5Q7L4P6 421 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 SFTPA1Q8IWL2 248 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 SCUBE3Q8IX30 993 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 FAM217AQ8IXS0 508 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 CPXM2Q8N436 756 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 NAT16Q8N8M0 369 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 SUMF1Q8NBK3 374 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 XPO6Q96QU8 1125 aaKnown RBP23.64■■□□□ 1.37
SNIP1-203ENST00000493916 TRIM62Q9BVG3 475 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 LHX5Q9H2C1 402 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 LIMA1Q9UHB6 759 aaKnown RBP23.64■■□□□ 1.37
SNIP1-203ENST00000493916 SFMBT1Q9UHJ3 866 aa23.64■■□□□ 1.37
SNIP1-203ENST00000493916 CCDC163A0A0D9SF12 145 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 E5RJQ4 531 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 ZNF18P17022 549 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 FNTBP49356 437 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 HARS2P49590 506 aaKnown RBP23.63■■□□□ 1.37
SNIP1-203ENST00000493916 SEC13P55735 322 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 NCAPHQ15003 741 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 HSF5Q4G112 596 aaPredicted RBP23.63■■□□□ 1.37
SNIP1-203ENST00000493916 CAVIN1Q6NZI2 390 aaKnown RBP23.63■■□□□ 1.37
SNIP1-203ENST00000493916 SLC47A2Q86VL8 602 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 WDR5BQ86VZ2 330 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 DENND1CQ8IV53 801 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 CAMKK1Q8N5S9 505 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 TERB1Q8NA31 727 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 ANKRD20A12PQ8NF67 263 aa23.63■■□□□ 1.37
SNIP1-203ENST00000493916 NAT10Q9H0A0 1025 aaKnown RBP23.63■■□□□ 1.37
SNIP1-203ENST00000493916 DNAJC17Q9NVM6 304 aaKnown RBP23.63■■□□□ 1.37
SNIP1-203ENST00000493916 PAPSS1O43252 624 aaPredicted RBP23.62■■□□□ 1.37
SNIP1-203ENST00000493916 LATS1O95835 1130 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 PENKP01210 267 aaPredicted RBP23.62■■□□□ 1.37
SNIP1-203ENST00000493916 IGLV3-27P01718 113 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 FYNP06241 537 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 CNR2P34972 360 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 DMC1Q14565 340 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 C2orf27AQ580R0 203 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 FKBP15Q5T1M5 1219 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 GRAMD4Q6IC98 578 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 NUDT18Q6ZVK8 323 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 WDTC1Q8N5D0 677 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 BPIFA3Q9BQP9 254 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 STK33Q9BYT3 514 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 GANQ9H2C0 597 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 STOML2Q9UJZ1 356 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 DAAM1Q9Y4D1 1078 aa23.62■■□□□ 1.37
SNIP1-203ENST00000493916 MYOFQ9NZM1 2061 aa23.61■■□□□ 1.37
SNIP1-203ENST00000493916 MSI1O43347 362 aaKnown RBP23.61■■□□□ 1.37
SNIP1-203ENST00000493916 NCAM1P13591 858 aa23.61■■□□□ 1.37
SNIP1-203ENST00000493916 KRT9P35527 623 aa23.61■■□□□ 1.37
SNIP1-203ENST00000493916 KIR2DL1P43626 348 aaPredicted RBP23.61■■□□□ 1.37
SNIP1-203ENST00000493916 COPB1P53618 953 aaKnown RBP23.61■■□□□ 1.37
SNIP1-203ENST00000493916 FYB2Q5VWT5 728 aa23.61■■□□□ 1.37
SNIP1-203ENST00000493916 KCNV2Q8TDN2 545 aa23.61■■□□□ 1.37
SNIP1-203ENST00000493916 FAM149B1Q96BN6 582 aa23.61■■□□□ 1.37
SNIP1-203ENST00000493916 P2RY11Q96G91 374 aa23.61■■□□□ 1.37
SNIP1-203ENST00000493916 NOX5Q96PH1 765 aa23.61■■□□□ 1.37
SNIP1-203ENST00000493916 HSD3B7Q9H2F3 369 aa23.61■■□□□ 1.37
SNIP1-203ENST00000493916 POLR3BQ9NW08 1133 aaPredicted RBP23.61■■□□□ 1.37
SNIP1-203ENST00000493916 MMP17Q9ULZ9 603 aa23.61■■□□□ 1.37
SNIP1-203ENST00000493916 TBC1D3BA6NDS4 549 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 LRRC10BA6NIK2 292 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 LGALS16A8MUM7 142 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 F8VZ95 297 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 HOXC13P31276 330 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 RING1Q06587 406 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 NNTQ13423 1086 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 ANO6Q4KMQ2 910 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 HEATR6Q6AI08 1181 aaKnown RBP23.6■■□□□ 1.37
SNIP1-203ENST00000493916 PASD1Q8IV76 773 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 AOPEPQ8N6M6 819 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 IL17RCQ8NAC3 791 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 DQX1Q8TE96 717 aaKnown RBP23.6■■□□□ 1.37
SNIP1-203ENST00000493916 PPP1R13BQ96KQ4 1090 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 HHIPQ96QV1 700 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 CPXM1Q96SM3 734 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 FBXO10Q9UK96 956 aa23.6■■□□□ 1.37
SNIP1-203ENST00000493916 SMG5Q9UPR3 1016 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms