RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 RXFP2Q8WXD0 754 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 NDRG1Q92597 394 aaKnown RBP12.97□□□□□ -0.33
SNX17-208ENST00000493711 EDEM1Q92611 657 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 PGAP3Q96FM1 320 aaPredicted RBP12.97□□□□□ -0.33
SNX17-208ENST00000493711 PIWIL1Q96J94 861 aaKnown RBP12.97□□□□□ -0.33
SNX17-208ENST00000493711 NPY6RQ99463 290 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 LACRTQ9GZZ8 138 aa12.97□□□□□ -0.33
SNX17-208ENST00000493711 HBS1LQ9Y450 684 aaKnown RBP12.97□□□□□ -0.33
SNX17-208ENST00000493711 RCCD1A6NED2 376 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 TADA3O75528 432 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 PROSCO94903 275 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 ENDOD1O94919 500 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 OLFM2O95897 454 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 TRUB2O95900 331 aaKnown RBP12.96□□□□□ -0.33
SNX17-208ENST00000493711 FYNP06241 537 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 PSMA2P25787 234 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 FLT3P36888 993 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 AVPR1AP37288 418 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 RPL7AP62424 266 aaKnown RBP12.96□□□□□ -0.33
SNX17-208ENST00000493711 SLC7A9P82251 487 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 RING1Q06587 406 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 GPR158Q5T848 1215 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 C11orf63Q6NUN7 778 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 CCAR2Q8N163 923 aaKnown RBP12.96□□□□□ -0.33
SNX17-208ENST00000493711 KIAA1958Q8N8K9 716 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 JOSD2Q8TAC2 188 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 DQX1Q8TE96 717 aaKnown RBP12.96□□□□□ -0.33
SNX17-208ENST00000493711 CENPIQ92674 756 aaPredicted RBP12.96□□□□□ -0.33
SNX17-208ENST00000493711 E2F7Q96AV8 911 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 ALS2CR12Q96Q35 445 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 SLITRK6Q9H5Y7 841 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 FAM204AQ9H8W3 233 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 TRPC7Q9HCX4 862 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 OSER1Q9NX31 292 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 MARCH2Q9P0N8 246 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 NAALADL1Q9UQQ1 740 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 ZKSCAN5Q9Y2L8 839 aa12.96□□□□□ -0.33
SNX17-208ENST00000493711 FAM170AA1A519 330 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 MACROD2A1Z1Q3 448 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 M0QYT0 321 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 COCHO43405 550 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 MOSPD3O75425 235 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 CKMP06732 381 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 KCNA5P22460 613 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 RDXP35241 583 aaKnown RBP12.95□□□□□ -0.34
SNX17-208ENST00000493711 PCK1P35558 622 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 CCR2P41597 374 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 SULT1E1P49888 294 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 AIF1P55008 147 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 NTHL1P78549 312 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 LSM11P83369 360 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNX17-208ENST00000493711 CYP4F8P98187 520 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 DEUP1Q05D60 604 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 DLX2Q07687 328 aaPredicted RBP12.95□□□□□ -0.34
SNX17-208ENST00000493711 EFEMP1Q12805 493 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 CBX2Q14781 532 aaPredicted RBP12.95□□□□□ -0.34
SNX17-208ENST00000493711 TEAD2Q15562 447 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 TRIP4Q15650 581 aaPredicted RBP12.95□□□□□ -0.34
SNX17-208ENST00000493711 SLC5A9Q2M3M2 681 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 LEXMQ3ZCV2 418 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 CCDC14Q49A88 953 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 BRMS1LQ5PSV4 323 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 SYPL2Q5VXT5 272 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 TXNDC8Q6A555 127 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 OTOP3Q7RTS5 596 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 UNC45BQ8IWX7 931 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 CMTM8Q8IZV2 173 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 EMC1Q8N766 993 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 MAB21L3Q8N8X9 362 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 TRIM58Q8NG06 486 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 KIAA1524Q8TCG1 905 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 ATXN2LQ8WWM7 1075 aaKnown RBP12.95□□□□□ -0.34
SNX17-208ENST00000493711 SUSD6Q92537 303 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 PLD4Q96BZ4 506 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 TCEAL4Q96EI5 215 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 CFAP57Q96MR6 1250 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 APOL5Q9BWW9 433 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 DCLK3Q9C098 648 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 CCSER2Q9H7U1 834 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 KIF9Q9HAQ2 790 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 OSGEPQ9NPF4 335 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 LZTFL1Q9NQ48 299 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 DDIT4Q9NX09 232 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 SLC12A6Q9UHW9 1150 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 CDH7Q9ULB5 785 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 PYCARDQ9ULZ3 195 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 GUCA1BQ9UMX6 200 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 ARHGAP26Q9UNA1 814 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 USTQ9Y2C2 406 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 TLR6Q9Y2C9 796 aa12.95□□□□□ -0.34
SNX17-208ENST00000493711 USP15Q9Y4E8 981 aaPredicted RBP12.95□□□□□ -0.34
SNX17-208ENST00000493711 CHD7Q9P2D1 2997 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 C2orf78A6NCI8 922 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 IRAK2O43187 625 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 KIF5CO60282 957 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 IGLV3-25P01717 112 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 MBL2P11226 248 aaPredicted RBP12.94□□□□□ -0.34
SNX17-208ENST00000493711 TCF3P15923 654 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 CEBPBP17676 345 aa12.94□□□□□ -0.34
SNX17-208ENST00000493711 CCR1P32246 355 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms