RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 MUC6Q6W4X9 2439 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 TBC1D3BA6NDS4 549 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 NEDD8-MDP1E9PL57 170 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 K7EQS6 105 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 HOXC11O43248 304 aaPredicted RBP7.29□□□□□ -1.24
TOP3A-207ENST00000493648 RNF40O75150 1001 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 KAT7O95251 611 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 PAPSS2O95340 614 aaPredicted RBP7.29□□□□□ -1.24
TOP3A-207ENST00000493648 KLKB1P03952 638 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 CYBBP04839 570 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 NCAM1P13591 858 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 ZNF18P17022 549 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 CORO1AP31146 461 aaKnown RBP7.29□□□□□ -1.24
TOP3A-207ENST00000493648 CLCN1P35523 988 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 ZNF165P49910 485 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 MRE11P49959 708 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 YWHAZP63104 245 aaKnown RBP7.29□□□□□ -1.24
TOP3A-207ENST00000493648 TPM4P67936 248 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 SATB1Q01826 763 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 PDCLQ13371 301 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 GAS6Q14393 721 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 NCAPHQ15003 741 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 TRIP4Q15650 581 aaPredicted RBP7.29□□□□□ -1.24
TOP3A-207ENST00000493648 GAB4Q2WGN9 574 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 FILIP1LQ4L180 1135 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 EFHC1Q5JVL4 640 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 TSSK4Q6SA08 328 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 Q6ZNB5 142 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 Q6ZS52 159 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 TPGS1Q6ZTW0 290 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 BEND5Q7L4P6 421 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 SLC47A2Q86VL8 602 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 DENND1CQ8IV53 801 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 FMNL3Q8IVF7 1028 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 UNC45BQ8IWX7 931 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 WDTC1Q8N5D0 677 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 NAT16Q8N8M0 369 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 TMEM35BQ8NCS4 154 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 NEK11Q8NG66 645 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 CLEC4CQ8WTT0 213 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 NKD2Q969F2 451 aaPredicted RBP7.29□□□□□ -1.24
TOP3A-207ENST00000493648 ACDQ96AP0 544 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 FAM149B1Q96BN6 582 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 PPP1R13BQ96KQ4 1090 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 SPAG5Q96R06 1193 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 PHOX2BQ99453 314 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 NAA15Q9BXJ9 866 aaKnown RBP7.29□□□□□ -1.24
TOP3A-207ENST00000493648 SYNCQ9H7C4 482 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 ARHGEF4Q9NR80 690 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 MARK1Q9P0L2 795 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 SFMBT1Q9UHJ3 866 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 AJAP1Q9UKB5 411 aaPredicted RBP7.29□□□□□ -1.24
TOP3A-207ENST00000493648 AGO1Q9UL18 857 aaKnown RBP7.29□□□□□ -1.24
TOP3A-207ENST00000493648 FHOD1Q9Y613 1164 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 R4GN57 208 aa7.29□□□□□ -1.24
TOP3A-207ENST00000493648 SYCE3A1L190 88 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 LGALS16A8MUM7 142 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 E5RJQ4 531 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 F8VZ95 297 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 PAPSS1O43252 624 aaPredicted RBP7.28□□□□□ -1.24
TOP3A-207ENST00000493648 TULP3O75386 442 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 CAVIN2O95810 425 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 LATS1O95835 1130 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 LMNAP02545 664 aaKnown RBP7.28□□□□□ -1.24
TOP3A-207ENST00000493648 GLI1P08151 1106 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 PNMA6AP0CW24 399 aaPredicted RBP7.28□□□□□ -1.24
TOP3A-207ENST00000493648 TYRP14679 529 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 CYP11B1P15538 503 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 HOXA6P31267 233 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 GBP1P32455 592 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 CNR2P34972 360 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 STAT1P42224 750 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 SLC11A2P49281 568 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 KLK7P49862 253 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 SEC13P55735 322 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 TBX4P57082 545 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 ZNF445P59923 1031 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 POLR2FP61218 127 aaKnown RBP7.28□□□□□ -1.24
TOP3A-207ENST00000493648 MRPS21P82921 87 aaKnown RBP7.28□□□□□ -1.24
TOP3A-207ENST00000493648 SYCP1Q15431 976 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 MPPE1Q53F39 396 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 C2orf27AQ580R0 203 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 NAIF1Q69YI7 327 aaPredicted RBP7.28□□□□□ -1.24
TOP3A-207ENST00000493648 GRAMD4Q6IC98 578 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 MSANTD2Q6P1R3 559 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 SYT13Q7L8C5 426 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 LONP2Q86WA8 852 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 C12orf40Q86WS4 652 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 ZNF677Q86XU0 584 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 ZDHHC17Q8IUH5 632 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 PASD1Q8IV76 773 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 ETFBKMTQ8IXQ9 262 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 CPXM2Q8N436 756 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 CAMKK1Q8N5S9 505 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 ZBTB44Q8NCP5 570 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 MSANTD4Q8NCY6 345 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 RPLP0P6Q8NHW5 317 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 KCNV2Q8TDN2 545 aa7.28□□□□□ -1.24
TOP3A-207ENST00000493648 IPO4Q8TEX9 1081 aaKnown RBP7.28□□□□□ -1.24
TOP3A-207ENST00000493648 DDI1Q8WTU0 396 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms