RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ACADMP11310 421 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 SYT1P21579 422 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 CDH8P55286 799 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 MAP3K7CLP57077 242 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 COG7P83436 770 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 STK38Q15208 465 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 KNOP1Q1ED39 458 aaKnown RBP11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 Q6ZNB5 142 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 ACOT1Q86TX2 421 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 ZCCHC9Q8N567 271 aaKnown RBP11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 BAHD1Q8TBE0 780 aaPredicted RBP11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 SETD7Q8WTS6 366 aaKnown RBP11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 PRCCQ92733 491 aaPredicted RBP11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 HPS3Q969F9 1004 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 WBP2Q969T9 261 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 SIPA1Q96FS4 1042 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 HNRNPABQ99729 332 aaKnown RBP11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 GPR174Q9BXC1 333 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 GZF1Q9H116 711 aaPredicted RBP11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 GAREM1Q9H706 876 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 OSGEPQ9NPF4 335 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 CLIC5Q9NZA1 410 aa11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 THAP10Q9P2Z0 257 aaPredicted RBP11.58□□□□□ -0.56
SNRNP200-207ENST00000493271 TIMM44O43615 452 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 CILPO75339 1184 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 DKK1O94907 266 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 C4BPAP04003 597 aaKnown RBP11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 CYBBP04839 570 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 RARGP13631 454 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 MAOBP27338 520 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 TPMTP51580 245 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 AFF3P51826 1226 aaKnown RBP11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 NDST1P52848 882 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 MFAP3P55082 362 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 ORC1Q13415 861 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 COL28A1Q2UY09 1125 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 SOWAHCQ53LP3 525 aaPredicted RBP11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 C10orf120Q5SQS8 335 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 DCAF12L1Q5VU92 463 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 FAM173BQ6P4H8 233 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 CLEC20AQ6ZU45 233 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 CCDC186Q7Z3E2 898 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 ANKS1BQ7Z6G8 1248 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 TMPRSS6Q8IU80 811 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 SLC9A9Q8IVB4 645 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 NELFCDQ8IXH7 590 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 PNPLA1Q8N8W4 532 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 SPRYD3Q8NCJ5 442 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 LINC00301Q8NCQ3 95 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 INTS4Q96HW7 963 aaKnown RBP11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 SLC2A11Q9BYW1 496 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 IMPG2Q9BZV3 1241 aa11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 MKRN2Q9H000 416 aaKnown RBP11.57□□□□□ -0.56
SNRNP200-207ENST00000493271 EIF4E1BA6NMX2 242 aaKnown RBP11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 LRRIQ3A6PVS8 624 aaPredicted RBP11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 WASH3PC4AMC7 463 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 IKBKBO14920 756 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 SPTLC2O15270 562 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 CUTAO60888 179 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 STC2O76061 302 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 BEST1O76090 585 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 YEATS4O95619 227 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 TBX18O95935 607 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 C7P10643 843 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 CCDC130P13994 396 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 IL12RB1P42701 662 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 KIF11P52732 1056 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 ZNF445P59923 1031 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 PDE4CQ08493 712 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 INCA1Q0VD86 236 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 TEAD4Q15561 434 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 HLA-BQ31612 363 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 INAVAQ3KP66 663 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 ZACNQ401N2 412 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 C19orf48Q6RUI8 117 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 SCARA5Q6ZMJ2 495 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 SLCO6A1Q86UG4 719 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 ARHGAP18Q8N392 663 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 CPXM2Q8N436 756 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 RHBDD1Q8TEB9 315 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 DHX58Q96C10 678 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 SDCBP2Q9H190 292 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 MIR1-1HGQ9H1L0 117 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 SLC6A17Q9H1V8 727 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 FBRSQ9HAH7 460 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 CYP3A43Q9HB55 503 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 CD93Q9NPY3 652 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 NAGPAQ9UK23 515 aa11.56□□□□□ -0.56
SNRNP200-207ENST00000493271 IGSF10Q6WRI0 2623 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 HHLA1C9JL84 531 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 CYP26A1O43174 497 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 TNFSF14O43557 240 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 DFNA5O60443 496 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 ASS1P00966 412 aaKnown RBP11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 GRK6P43250 576 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 GRIA4P48058 902 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 CASP4P49662 377 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 PGFP49763 221 aa11.55□□□□□ -0.56
SNRNP200-207ENST00000493271 ARID5AQ03989 594 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms