RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 C18orf8Q96DM3 657 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 PIWIL1Q96J94 861 aaKnown RBP13.35□□□□□ -0.27
CLIP2-209ENST00000493166 OSBPL6Q9BZF3 934 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 EDEM3Q9BZQ6 932 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 DCLK3Q9C098 648 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 TTYH3Q9C0H2 523 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 ASNSD1Q9NWL6 643 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 NAALADL1Q9UQQ1 740 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 ZNF510Q9Y2H8 683 aa13.35□□□□□ -0.27
CLIP2-209ENST00000493166 HBS1LQ9Y450 684 aaKnown RBP13.35□□□□□ -0.27
CLIP2-209ENST00000493166 MTF2Q9Y483 593 aaPredicted RBP13.35□□□□□ -0.27
CLIP2-209ENST00000493166 GREM1O60565 184 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 GLI1P08151 1106 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 ADH5P11766 374 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 HARS2P49590 506 aaKnown RBP13.34□□□□□ -0.27
CLIP2-209ENST00000493166 SLC6A3Q01959 620 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 TAF5Q15542 800 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 LY6G5CQ5SRR4 150 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 Q6ZNB5 142 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 ZNF397Q8NF99 534 aaPredicted RBP13.34□□□□□ -0.27
CLIP2-209ENST00000493166 DQX1Q8TE96 717 aaKnown RBP13.34□□□□□ -0.27
CLIP2-209ENST00000493166 IQCDQ96DY2 449 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 SERPINB11Q96P15 392 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 AGPAT1Q99943 283 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 SPHK2Q9NRA0 654 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 HCN4Q9Y3Q4 1203 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 ITIH6Q6UXX5 1313 aa13.34□□□□□ -0.27
CLIP2-209ENST00000493166 A0A1W2PQJ5 194 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 GRAP2O75791 330 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 KLKB1P03952 638 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 CYP1A1P04798 512 aaPredicted RBP13.33□□□□□ -0.28
CLIP2-209ENST00000493166 NSFP46459 744 aaKnown RBP13.33□□□□□ -0.28
CLIP2-209ENST00000493166 GABRB2P47870 512 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 LRRC32Q14392 662 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 TRIP4Q15650 581 aaPredicted RBP13.33□□□□□ -0.28
CLIP2-209ENST00000493166 CLEC16AQ2KHT3 1053 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 ANO4Q32M45 955 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 C2CD6Q53TS8 623 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 DCAF6Q58WW2 860 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 FAM102AQ5T9C2 384 aaPredicted RBP13.33□□□□□ -0.28
CLIP2-209ENST00000493166 SYPL2Q5VXT5 272 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 RHBDF2Q6PJF5 856 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 SLC26A9Q7LBE3 791 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 IRF2BP2Q7Z5L9 587 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 TAC4Q86UU9 113 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 XYLT1Q86Y38 959 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 DENND1CQ8IV53 801 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 SLC30A5Q8TAD4 765 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 ADAM32Q8TC27 787 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 CPLX3Q8WVH0 158 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 CHFRQ96EP1 664 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 NUCKS1Q9H1E3 243 aaKnown RBP13.33□□□□□ -0.28
CLIP2-209ENST00000493166 AIPL1Q9NZN9 384 aa13.33□□□□□ -0.28
CLIP2-209ENST00000493166 AGO1Q9UL18 857 aaKnown RBP13.33□□□□□ -0.28
CLIP2-209ENST00000493166 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLIP2-209ENST00000493166 GOLGA8SH3BPF8 625 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 TRDMT1O14717 391 aaKnown RBP13.32□□□□□ -0.28
CLIP2-209ENST00000493166 DAB1O75553 588 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 IGLV3-27P01718 113 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 UNGP13051 313 aaPredicted RBP13.32□□□□□ -0.28
CLIP2-209ENST00000493166 TNFAIP3P21580 790 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 MMP8P22894 467 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 SCNN1AP37088 669 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 MAGEA9P43362 315 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 TBX4P57082 545 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 RNASE9P60153 205 aaKnown RBP13.32□□□□□ -0.28
CLIP2-209ENST00000493166 CDK17Q00537 523 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 CENPCQ03188 943 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 GAD2Q05329 585 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 KLHL30Q0D2K2 578 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLIP2-209ENST00000493166 NNTQ13423 1086 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 E4F1Q66K89 784 aaPredicted RBP13.32□□□□□ -0.28
CLIP2-209ENST00000493166 NUGGCQ68CJ6 796 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 MMS22LQ6ZRQ5 1243 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 TPGS1Q6ZTW0 290 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 TMEM25Q86YD3 366 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 UNC45BQ8IWX7 931 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 DEFB106AQ8N104 65 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 ZNF687Q8N1G0 1237 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 CD101Q93033 1021 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 SLC2A13Q96QE2 648 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 PCDHB18PQ96TA0 734 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 P2RY13Q9BPV8 354 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 C11orf70Q9BRQ4 267 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 FAM204AQ9H8W3 233 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 LMAN1LQ9HAT1 526 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 DLGAP2Q9P1A6 1054 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 CAPN11Q9UMQ6 739 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 TLR6Q9Y2C9 796 aa13.32□□□□□ -0.28
CLIP2-209ENST00000493166 NEDD8-MDP1E9PL57 170 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 IRAK2O43187 625 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 HOXC11O43248 304 aaPredicted RBP13.31□□□□□ -0.28
CLIP2-209ENST00000493166 LATS1O95835 1130 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 TRUB2O95900 331 aaKnown RBP13.31□□□□□ -0.28
CLIP2-209ENST00000493166 GYPCP04921 128 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 CHRNB1P11230 501 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 DRD1P21728 446 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 NOS2P35228 1153 aa13.31□□□□□ -0.28
CLIP2-209ENST00000493166 CHKAP35790 457 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms