RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 PRRX2Q99811 253 aa18.51■□□□□ 0.55
LMNB1-206ENST00000492190 SPHK2Q9NRA0 654 aa18.51■□□□□ 0.55
LMNB1-206ENST00000492190 C2orf42Q9NWW7 574 aa18.51■□□□□ 0.55
LMNB1-206ENST00000492190 LSM7Q9UK45 103 aaKnown RBP18.51■□□□□ 0.55
LMNB1-206ENST00000492190 STRIP2Q9ULQ0 834 aa18.51■□□□□ 0.55
LMNB1-206ENST00000492190 ARIH1Q9Y4X5 557 aaPredicted RBP18.51■□□□□ 0.55
LMNB1-206ENST00000492190 EML5Q05BV3 1969 aa18.51■□□□□ 0.55
LMNB1-206ENST00000492190 FRYLO94915 3013 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 ADH5P11766 374 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 MAGEA9P43362 315 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 NOMO3P69849 1222 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 PITX1P78337 314 aaPredicted RBP18.5■□□□□ 0.55
LMNB1-206ENST00000492190 ANGPT1Q15389 498 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 FILIP1LQ4L180 1135 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 DGKKQ5KSL6 1271 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 PKN3Q6P5Z2 889 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 LRSAM1Q6UWE0 723 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 DENND1CQ8IV53 801 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 C1orf210Q8IVY1 113 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 SFTPA1Q8IWL2 248 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 ETFBKMTQ8IXQ9 262 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 TMEM35BQ8NCS4 154 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 DQX1Q8TE96 717 aaKnown RBP18.5■□□□□ 0.55
LMNB1-206ENST00000492190 CD101Q93033 1021 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 PLD4Q96BZ4 506 aa18.5■□□□□ 0.55
LMNB1-206ENST00000492190 AGO1Q9UL18 857 aaKnown RBP18.5■□□□□ 0.55
LMNB1-206ENST00000492190 HBS1LQ9Y450 684 aaKnown RBP18.5■□□□□ 0.55
LMNB1-206ENST00000492190 ZFHX2Q9C0A1 2572 aaPredicted RBP18.5■□□□□ 0.55
LMNB1-206ENST00000492190 RIF1Q5UIP0 2472 aaKnown RBP18.49■□□□□ 0.55
LMNB1-206ENST00000492190 USP34Q70CQ2 3546 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 A0A1W2PQC6 194 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 HOXC11O43248 304 aaPredicted RBP18.49■□□□□ 0.55
LMNB1-206ENST00000492190 SART1O43290 800 aaKnown RBP18.49■□□□□ 0.55
LMNB1-206ENST00000492190 ADH1CP00326 375 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 SERPINC1P01008 464 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 IGLV3-27P01718 113 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 NCAM1P13591 858 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 PBX1P40424 430 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 AMPD2Q01433 879 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 CDR2Q01850 454 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 C2CD6Q53TS8 623 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 OR6B2Q6IFH4 312 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 OLFML1Q6UWY5 402 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 BEND5Q7L4P6 421 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 PHTF2Q8N3S3 785 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 OLIG1Q8TAK6 271 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 ADAM32Q8TC27 787 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 NOX5Q96PH1 765 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 PCDHB18PQ96TA0 734 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 DCLK3Q9C098 648 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 TTYH3Q9C0H2 523 aa18.49■□□□□ 0.55
LMNB1-206ENST00000492190 SPATA6Q9NWH7 488 aaPredicted RBP18.49■□□□□ 0.55
LMNB1-206ENST00000492190 TRIM24O15164 1050 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 GRAP2O75791 330 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 CYP1A1P04798 512 aaPredicted RBP18.48■□□□□ 0.55
LMNB1-206ENST00000492190 HOXC13P31276 330 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 GABRB2P47870 512 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 PTPN5P54829 565 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 YWHAZP63104 245 aaKnown RBP18.48■□□□□ 0.55
LMNB1-206ENST00000492190 ARID5AQ03989 594 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 GAD2Q05329 585 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 GRSF1Q12849 480 aaKnown RBP eCLIP18.48■□□□□ 0.55
LMNB1-206ENST00000492190 LRRC32Q14392 662 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 NAA35Q5VZE5 725 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 TPGS1Q6ZTW0 290 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 TAC4Q86UU9 113 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 ZNF677Q86XU0 584 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 NAT16Q8N8M0 369 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 CPA5Q8WXQ8 436 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 GOLGA1Q92805 767 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 SLC2A13Q96QE2 648 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 PDCL3Q9H2J4 239 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 TSPY26PQ9H489 355 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 POPDC2Q9HBU9 364 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 MARK1Q9P0L2 795 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 CEP83Q9Y592 693 aa18.48■□□□□ 0.55
LMNB1-206ENST00000492190 GOLGA6L19H0YKK7 550 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 K7EQS6 105 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 LSM8O95777 96 aaKnown RBP18.47■□□□□ 0.55
LMNB1-206ENST00000492190 CHRM1P11229 460 aaPredicted RBP18.47■□□□□ 0.55
LMNB1-206ENST00000492190 DRD1P21728 446 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 TPM4P67936 248 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 SLC6A3Q01959 620 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 NHLH1Q02575 133 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 ANO4Q32M45 955 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 E4F1Q66K89 784 aaPredicted RBP18.47■□□□□ 0.55
LMNB1-206ENST00000492190 CACNA2D4Q7Z3S7 1137 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 IRF2BP2Q7Z5L9 587 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 XYLT1Q86Y38 959 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 FAM217AQ8IXS0 508 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 DEFB106AQ8N104 65 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 SLC39A13Q96H72 371 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 FCRL2Q96LA5 508 aaPredicted RBP18.47■□□□□ 0.55
LMNB1-206ENST00000492190 FAM86C1Q9NVL1 165 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 POLR3BQ9NW08 1133 aaPredicted RBP18.47■□□□□ 0.55
LMNB1-206ENST00000492190 ASNSD1Q9NWL6 643 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 ZNF510Q9Y2H8 683 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 SPAG17Q6Q759 2223 aa18.47■□□□□ 0.55
LMNB1-206ENST00000492190 NEDD8-MDP1E9PL57 170 aa18.46■□□□□ 0.55
LMNB1-206ENST00000492190 GFRA2O00451 464 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms