RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 NFE2L3Q9Y4A8 694 aa13.96□□□□□ -0.17
USF1-206ENST00000491629 MORC2Q9Y6X9 1032 aaPredicted RBP13.96□□□□□ -0.17
USF1-206ENST00000491629 C4BPAP04003 597 aaKnown RBP13.95□□□□□ -0.18
USF1-206ENST00000491629 NEFLP07196 543 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 ZNF883P0CG24 379 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 GNSP15586 552 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 CASP1P29466 404 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 MFAP3P55082 362 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 TRPC3Q13507 836 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 HLA-BQ31612 363 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 FYB2Q5VWT5 728 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 SETD7Q8WTS6 366 aaKnown RBP13.95□□□□□ -0.18
USF1-206ENST00000491629 SYAP1Q96A49 352 aaPredicted RBP13.95□□□□□ -0.18
USF1-206ENST00000491629 LRIG1Q96JA1 1093 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 TNMDQ9H2S6 317 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 PRDM16Q9HAZ2 1276 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 SCUBE2Q9NQ36 999 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 TLR8Q9NR97 1041 aaKnown RBP13.95□□□□□ -0.18
USF1-206ENST00000491629 TM7SF3Q9NS93 570 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.95□□□□□ -0.18
USF1-206ENST00000491629 DKK4Q9UBT3 224 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 EIF2B4Q9UI10 523 aaKnown RBP13.95□□□□□ -0.18
USF1-206ENST00000491629 SLC27A6Q9Y2P4 619 aa13.95□□□□□ -0.18
USF1-206ENST00000491629 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.95□□□□□ -0.18
USF1-206ENST00000491629 NYNRINQ9P2P1 1898 aaKnown RBP13.95□□□□□ -0.18
USF1-206ENST00000491629 ATP8B3O60423 1300 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 A0A1W2PQH9 124 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 LRRIQ3A6PVS8 624 aaPredicted RBP13.94□□□□□ -0.18
USF1-206ENST00000491629 METTL12A8MUP2 240 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 MEI4A8MW99 385 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 BCAT2O15382 392 aaPredicted RBP13.94□□□□□ -0.18
USF1-206ENST00000491629 STC2O76061 302 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 PENKP01210 267 aaPredicted RBP13.94□□□□□ -0.18
USF1-206ENST00000491629 IGLV3-19P01714 112 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 ATP5C1P36542 298 aaKnown RBP13.94□□□□□ -0.18
USF1-206ENST00000491629 CLDN10P78369 228 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 CYP4F3Q08477 520 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 CUL4AQ13619 759 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 BMT2Q1RMZ1 405 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 ZNF699Q32M78 642 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 FAM26FQ5R3K3 315 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 TMEM215Q68D42 235 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 CNNM4Q6P4Q7 775 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 CLEC20AQ6ZU45 233 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 SCD5Q86SK9 330 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 TMPRSS6Q8IU80 811 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 CRYBG2Q8N1P7 616 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 SPRYD3Q8NCJ5 442 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 CADM4Q8NFZ8 388 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 PARD3BQ8TEW8 1205 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 PIWIL1Q96J94 861 aaKnown RBP13.94□□□□□ -0.18
USF1-206ENST00000491629 TNIP3Q96KP6 325 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 TWNKQ96RR1 684 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 NACA2Q9H009 215 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 MIR1-1HGQ9H1L0 117 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 FAM49BQ9NUQ9 324 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 SCML2Q9UQR0 700 aa13.94□□□□□ -0.18
USF1-206ENST00000491629 ZNF462Q96JM2 2506 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 COL5A1P20908 1838 aaPredicted RBP13.93□□□□□ -0.18
USF1-206ENST00000491629 A0A1B0GVT2 93 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 FAM149AA5PLN7 773 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 TRABD2BA6NFA1 517 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 ZBTB24O43167 697 aaPredicted RBP13.93□□□□□ -0.18
USF1-206ENST00000491629 PRKCHP24723 683 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 MATKP42679 507 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 CSNK1EP49674 416 aaKnown RBP13.93□□□□□ -0.18
USF1-206ENST00000491629 NDST1P52848 882 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 ASIC1P78348 528 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 DLG4P78352 724 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 ZNF667Q5HYK9 610 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 SPOPLQ6IQ16 392 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 STXBP4Q6ZWJ1 553 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 CACUL1Q86Y37 369 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 C12orf56Q8IXR9 622 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 FBXO44Q9H4M3 255 aa13.93□□□□□ -0.18
USF1-206ENST00000491629 RARGP13631 454 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 SYT1P21579 422 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 ADORA2BP29275 332 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 ASPAP45381 313 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 NCOA4Q13772 614 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 ZNF234Q14588 700 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 PTPRNQ16849 979 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 KCNT1Q5JUK3 1230 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 KLHDC10Q6PID8 442 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 ADAM32Q8TC27 787 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 RHBDD1Q8TEB9 315 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 SORCS1Q8WY21 1168 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 JAKMIP2Q96AA8 810 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 SIPA1Q96FS4 1042 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 C7orf25Q9BPX7 421 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 C6orf106Q9H6K1 298 aaPredicted RBP13.92□□□□□ -0.18
USF1-206ENST00000491629 LSM7Q9UK45 103 aaKnown RBP13.92□□□□□ -0.18
USF1-206ENST00000491629 PCDHGB2Q9Y5G2 931 aa13.92□□□□□ -0.18
USF1-206ENST00000491629 UBE4BO95155 1302 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 MAST4O15021 2626 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 GOLGA8CPA6NN73 597 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 KCNK3O14649 394 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 PHACTR2O75167 634 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 CER1O95813 267 aa13.91□□□□□ -0.18
USF1-206ENST00000491629 PRB1P04280 392 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms