RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 E2F6O75461 281 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 MAPTP10636 758 aaKnown RBP13.22□□□□□ -0.29
SHOX2-205ENST00000490689 TPH1P17752 444 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 ZACNQ401N2 412 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 TEDDM1Q5T9Z0 273 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 DDHD1Q8NEL9 900 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 DGCR14Q96DF8 476 aaKnown RBP13.22□□□□□ -0.29
SHOX2-205ENST00000490689 CNPY3Q9BT09 278 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 FAM198AQ9UFP1 575 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 MRPL42Q9Y6G3 142 aaKnown RBP13.22□□□□□ -0.29
SHOX2-205ENST00000490689 SMIM31A0A1B0GVY4 71 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 RARBP10826 455 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 GNL1P36915 607 aaPredicted RBP13.22□□□□□ -0.29
SHOX2-205ENST00000490689 KPNA2P52292 529 aaKnown RBP13.22□□□□□ -0.29
SHOX2-205ENST00000490689 DGKDQ16760 1214 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 GOLGA7BQ2TAP0 167 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 ACOT1Q86TX2 421 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 EXOC8Q8IYI6 725 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 BANPQ8N9N5 519 aa13.22□□□□□ -0.29
SHOX2-205ENST00000490689 GSTA4O15217 222 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 TMEM63AO94886 807 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 SERPINA6P08185 405 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 ZFXP17010 805 aaPredicted RBP13.21□□□□□ -0.29
SHOX2-205ENST00000490689 EPHA3P29320 983 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 PLIN5Q00G26 463 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 MSS51Q4VC12 460 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 DCAF6Q58WW2 860 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 CDCA2Q69YH5 1023 aaPredicted RBP13.21□□□□□ -0.29
SHOX2-205ENST00000490689 RAB44Q7Z6P3 723 aaPredicted RBP13.21□□□□□ -0.29
SHOX2-205ENST00000490689 FSD1LQ9BXM9 530 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 GPR88Q9GZN0 384 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 WDR55Q9H6Y2 383 aaPredicted RBP13.21□□□□□ -0.29
SHOX2-205ENST00000490689 IGLV3-22A0A075B6J6 115 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 PABPN1LA6NDY0 278 aaKnown RBP13.21□□□□□ -0.29
SHOX2-205ENST00000490689 SYCE1LA8MT33 242 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 UGT1A9O60656 530 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 EFNA5P52803 228 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 TAF5Q15542 800 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 BBS12Q6ZW61 710 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 ANKS1BQ7Z6G8 1248 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 SCUBE3Q8IX30 993 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 C7orf43Q8WVR3 580 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 SLC44A1Q8WWI5 657 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 HPDLQ96IR7 371 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 FRMD8Q9BZ67 464 aaPredicted RBP13.21□□□□□ -0.29
SHOX2-205ENST00000490689 PIF1Q9H611 641 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 UGT1A7Q9HAW7 530 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 UGT1A10Q9HAW8 530 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 UGT1A8Q9HAW9 530 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 ZNF70Q9UC06 446 aaPredicted RBP13.21□□□□□ -0.29
SHOX2-205ENST00000490689 ZNF229Q9UJW7 825 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 DOLKQ9UPQ8 538 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 PLLPQ9Y342 182 aa13.21□□□□□ -0.29
SHOX2-205ENST00000490689 HBS1LQ9Y450 684 aaKnown RBP13.21□□□□□ -0.29
SHOX2-205ENST00000490689 LSM8O95777 96 aaKnown RBP13.21□□□□□ -0.3
SHOX2-205ENST00000490689 COX4I1P13073 169 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 ME2P23368 584 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 PTGER2P43116 358 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 ZBTB17Q13105 803 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 NEDD8Q15843 81 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 AGKQ53H12 422 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 CCDC92Q53HC0 331 aaPredicted RBP13.21□□□□□ -0.3
SHOX2-205ENST00000490689 C6orf52Q5T4I8 152 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 MON1BQ7L1V2 547 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 CMC1Q7Z7K0 106 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 AMIGO2Q86SJ2 522 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 TFB1MQ8WVM0 346 aaKnown RBP13.21□□□□□ -0.3
SHOX2-205ENST00000490689 FAM136AQ96C01 138 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 CHST12Q9NRB3 414 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 RUVBL2Q9Y230 463 aaKnown RBP13.21□□□□□ -0.3
SHOX2-205ENST00000490689 FER1L4A9Z1Z3 1794 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 ANGPT2O15123 496 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 MTA2O94776 668 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 OR6B1O95007 311 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 ADSSP30520 456 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 PTPN11Q06124 597 aaPredicted RBP13.21□□□□□ -0.3
SHOX2-205ENST00000490689 ZBTB41Q5SVQ8 909 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 ATF7IP2Q5U623 682 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 CGB2Q6NT52 195 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 KCNT2Q6UVM3 1135 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 TRIM74Q86UV6 250 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 TRIM73Q86UV7 250 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 C10orf107Q8IVU9 208 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 COLGALT1Q8NBJ5 622 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 ADAM32Q8TC27 787 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 RMND5BQ96G75 393 aaPredicted RBP13.21□□□□□ -0.3
SHOX2-205ENST00000490689 WRNIP1Q96S55 665 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 NT5C1AQ9BXI3 368 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 VPS33BQ9H267 617 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 MRPL40Q9NQ50 206 aaKnown RBP13.21□□□□□ -0.3
SHOX2-205ENST00000490689 IARS2Q9NSE4 1012 aaKnown RBP13.21□□□□□ -0.3
SHOX2-205ENST00000490689 PKD2L2Q9NZM6 624 aa13.21□□□□□ -0.3
SHOX2-205ENST00000490689 CRYBG1Q9Y4K1 1723 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 A0A096LPK6 155 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 OGTO15294 1046 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 TCEA3O75764 348 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 MMP8P22894 467 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 CYP2F1P24903 491 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 CDKN2BP42772 138 aa13.2□□□□□ -0.3
SHOX2-205ENST00000490689 GTF2A2P52657 109 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms