RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 CDV3Q9UKY7 258 aaKnown RBP10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 ZNF510Q9Y2H8 683 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 SLC27A6Q9Y2P4 619 aa10.21□□□□□ -0.77
TMEM39A-210ENST00000490099 RALGAPA1Q6GYQ0 2036 aa10.21□□□□□ -0.78
TMEM39A-210ENST00000490099 A0A1W2PQF6 199 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 TBC1D3BA6NDS4 549 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 PRRT4C9JH25 899 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 DCLK1O15075 740 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 RHOBTB1O94844 696 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 GNA14O95837 355 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 SETSIPP0DME0 302 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 CCDC192P0DO97 292 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 TYRP14679 529 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 P2RY2P41231 377 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 RPL34P49207 117 aaKnown RBP10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 TKTL1P51854 596 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 BCAT1P54687 386 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 SEC13P55735 322 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 GCNT1Q02742 428 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 ENPP2Q13822 863 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 CNGA2Q16280 664 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 ANO4Q32M45 955 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 MAP7D1Q3KQU3 841 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 SGO2Q562F6 1265 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 SPDYCQ5MJ68 293 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 PMS2CLQ68D20 193 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 ISM2Q6H9L7 571 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 MIB1Q86YT6 1006 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 CPXM2Q8N436 756 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 TRIML1Q8N9V2 468 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 RBBP8NLQ8NC74 664 aaPredicted RBP10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 EHBP1Q8NDI1 1231 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 PTCD2Q8WV60 388 aaKnown RBP10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 NELFBQ8WX92 580 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 GABRG3Q99928 467 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 BBS2Q9BXC9 721 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 ULBP1Q9BZM6 244 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 DCLK3Q9C098 648 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 VPS45Q9NRW7 570 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 MARCH2Q9P0N8 246 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 STOML2Q9UJZ1 356 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 LSM7Q9UK45 103 aaKnown RBP10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 TSPAN16Q9UKR8 245 aa10.2□□□□□ -0.78
TMEM39A-210ENST00000490099 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 BICDL2A1A5D9 508 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 YJEFN3A6XGL0 299 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 E7ENQ6 273 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 GDF9O60383 454 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 IRF1P10914 325 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 BCKDHBP21953 392 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 NTSR1P30989 418 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 CHKAP35790 457 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 MPLP40238 635 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 SLC8A3P57103 927 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 YWHAGP61981 247 aaKnown RBP eCLIP10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 KDSRQ06136 332 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 BST2Q10589 180 aaKnown RBP10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 KCNH2Q12809 1159 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 SF3A2Q15428 464 aaKnown RBP10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 ELF2Q15723 593 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 GOLGA7BQ2TAP0 167 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 FYB2Q5VWT5 728 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 BSPRYQ5W0U4 402 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 RNF43Q68DV7 783 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 GRAMD4Q6IC98 578 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 ANO7Q6IWH7 933 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 MSANTD2Q6P1R3 559 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 TOGARAM2Q6ZUX3 1019 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 NUDT18Q6ZVK8 323 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 TRMT11Q7Z4G4 463 aaKnown RBP10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 NDRG1Q92597 394 aaKnown RBP10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 KAT5Q92993 513 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 KREMEN1Q96MU8 473 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 NT5C1BQ96P26 610 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 XPO6Q96QU8 1125 aaKnown RBP10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 POLMQ9NP87 494 aaPredicted RBP10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 CNGB3Q9NQW8 809 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 RXFP3Q9NSD7 469 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 AGO1Q9UL18 857 aaKnown RBP10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 HBS1LQ9Y450 684 aaKnown RBP10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 DNAH14Q0VDD8 3507 aa10.19□□□□□ -0.78
TMEM39A-210ENST00000490099 DCDC2BA2VCK2 349 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 NEDD8-MDP1E9PL57 170 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 ALDH1A2O94788 518 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 IGLV3-27P01718 113 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 GABRG2P18507 467 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 MFAP3P55082 362 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 DAOAP59103 153 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 UBE2HP62256 183 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 EFEMP1Q12805 493 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 LRMPQ12912 555 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 PAK1Q13153 545 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 STILQ15468 1287 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 MEA1Q16626 185 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 C10orf76Q5T2E6 689 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 EGFLAMQ63HQ2 1017 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 KLHL10Q6JEL2 608 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 PMF1Q6P1K2 205 aa10.18□□□□□ -0.78
TMEM39A-210ENST00000490099 TMEM270Q6UE05 265 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms