RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 H0YCG3 227 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 COCHO43405 550 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 CDKL5O76039 1030 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 DNTTP04053 509 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 OR52Z1P0C646 297 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 MAPTP10636 758 aaKnown RBP12.22□□□□□ -0.45
HDAC6-233ENST00000489352 NOP14P78316 857 aaKnown RBP12.22□□□□□ -0.45
HDAC6-233ENST00000489352 GOLGA8FQ08AF8 430 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 GOLGA8DPQ0D2H9 430 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 NR5A1Q13285 461 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 SKIDA1Q1XH10 827 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 IGF2-ASQ6U949 168 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 SERPINA13PQ6UXR4 307 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 DAW1Q8N136 415 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 FBXL16Q8N461 479 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 TMEM161BQ8NDZ6 487 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 OR2T3Q8NH03 318 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 SPATA20Q8TB22 786 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 ZNF564Q8TBZ8 553 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-233ENST00000489352 GANCQ8TET4 914 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 TMPRSS4Q9NRS4 437 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 DDX19AQ9NUU7 478 aaKnown RBP12.22□□□□□ -0.45
HDAC6-233ENST00000489352 LSM7Q9UK45 103 aaKnown RBP12.22□□□□□ -0.45
HDAC6-233ENST00000489352 ATXN7L1Q9ULK2 861 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-233ENST00000489352 L1RE1Q9UN81 338 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 DNM3Q9UQ16 869 aa12.22□□□□□ -0.45
HDAC6-233ENST00000489352 LRRK1Q38SD2 2015 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 A0A1W2PPC4 97 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 CISD3P0C7P0 127 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 RPS6KB1P23443 525 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 MCM7P33993 719 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 DUSP3P51452 185 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-233ENST00000489352 STK3Q13188 491 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 ZNF234Q14588 700 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 CCDC142Q17RM4 750 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 PROX2Q3B8N5 592 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 TTC31Q49AM3 519 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-233ENST00000489352 CDCP2Q5VXM1 449 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 KIAA0895LQ68EN5 471 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 ADGRF2Q8IZF7 708 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 FBXO32Q969P5 355 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 PKMYT1Q99640 499 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 DUSP9Q99956 384 aaKnown RBP12.21□□□□□ -0.45
HDAC6-233ENST00000489352 GZF1Q9H116 711 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-233ENST00000489352 EVA1BQ9NVM1 165 aa12.21□□□□□ -0.45
HDAC6-233ENST00000489352 GEMIN8Q9NWZ8 242 aaKnown RBP12.21□□□□□ -0.45
HDAC6-233ENST00000489352 R3HCC1Q9Y3T6 440 aaKnown RBP12.21□□□□□ -0.45
HDAC6-233ENST00000489352 ZFC3H1O60293 1989 aaKnown RBP12.2□□□□□ -0.46
HDAC6-233ENST00000489352 SIGLEC6O43699 453 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 AGFG2O95081 481 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 PLS3P13797 630 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 ACO1P21399 889 aaKnown RBP12.2□□□□□ -0.46
HDAC6-233ENST00000489352 YWHAQP27348 245 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 SKOR1P84550 965 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 ZNF211Q13398 564 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-233ENST00000489352 SFMBT2Q5VUG0 894 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 TMC6Q7Z403 805 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 ATCAYQ86WG3 371 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 MYLPFQ96A32 169 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 TIPINQ9BVW5 301 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 AGXT2Q9BYV1 514 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 CIPCQ9C0C6 399 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 ERVMER34-1Q9H9K5 563 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 GJB4Q9NTQ9 266 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 PLK2Q9NYY3 685 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 MARK1Q9P0L2 795 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 CHORDC1Q9UHD1 332 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-233ENST00000489352 CPSF3Q9UKF6 684 aaKnown RBP12.2□□□□□ -0.46
HDAC6-233ENST00000489352 AGAP1Q9UPQ3 857 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 KIF26BQ2KJY2 2108 aa12.2□□□□□ -0.46
HDAC6-233ENST00000489352 F8VP50 259 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 TLR4O00206 839 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 EFSO43281 561 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 ATP2C2O75185 946 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 RTN3O95197 1032 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-233ENST00000489352 WNT1P04628 370 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 THEGLP0DJG4 465 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 PRKCHP24723 683 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 PSMA5P28066 241 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 TNFRSF8P28908 595 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 CASRP41180 1078 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 RXRGP48443 463 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 ACOT2P49753 483 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 ZBTB16Q05516 673 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 RAD51AP2Q09MP3 1159 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 ENPP2Q13822 863 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 TBR1Q16650 682 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 FAM171BQ6P995 826 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 HTR3DQ70Z44 454 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 HS2ST1Q7LGA3 356 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 KANSL1Q7Z3B3 1105 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 MAPK15Q8TD08 544 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 OVCA2Q8WZ82 227 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 GTF3C6Q969F1 213 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 GRAMD1AQ96CP6 724 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 SYT15Q9BQS2 421 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 TMEM60Q9H2L4 133 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 CCSER2Q9H7U1 834 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 ELOVL2Q9NXB9 296 aa12.19□□□□□ -0.46
HDAC6-233ENST00000489352 ANAPC2Q9UJX6 822 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms