RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 CSDE1O75534 798 aaKnown RBP20.18■□□□□ 0.82
HMG20B-213ENST00000488973 HOXC6P09630 235 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 CSH1P0DML2 217 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 CSH2P0DML3 217 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 ZNF24P17028 368 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 SERPINB9P50453 376 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 UBAP2LQ14157 1087 aaKnown RBP20.18■□□□□ 0.82
HMG20B-213ENST00000488973 CNPY1Q3B7I2 92 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 EFHC1Q5JVL4 640 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 SNRNP48Q6IEG0 339 aaKnown RBP20.18■□□□□ 0.82
HMG20B-213ENST00000488973 WDR75Q8IWA0 830 aaKnown RBP20.18■□□□□ 0.82
HMG20B-213ENST00000488973 STKLD1Q8NE28 680 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 MCUQ8NE86 351 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.18■□□□□ 0.821e-6■□□□□ 10.5
HMG20B-213ENST00000488973 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.18■□□□□ 0.82
HMG20B-213ENST00000488973 EBF4Q9BQW3 602 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 ETNK2Q9NVF9 386 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 GALNT8Q9NY28 637 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 TBC1D30Q9Y2I9 924 aa20.18■□□□□ 0.82
HMG20B-213ENST00000488973 FAM159BA6NKW6 160 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 UGT1A9O60656 530 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 OAZ1P54368 228 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 INHBCP55103 352 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 LIN52Q52LA3 116 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 STXBP5Q5T5C0 1151 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 RASIP1Q5U651 963 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 UNC5AQ6ZN44 842 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 CYP4V2Q6ZWL3 525 aaPredicted RBP20.17■□□□□ 0.82
HMG20B-213ENST00000488973 ILDR2Q71H61 639 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 DHDDSQ86SQ9 333 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 PDSS2Q86YH6 399 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 REPS2Q8NFH8 660 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 ACO2Q99798 780 aaKnown RBP20.17■□□□□ 0.82
HMG20B-213ENST00000488973 UGT1A7Q9HAW7 530 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 UGT1A10Q9HAW8 530 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 UGT1A8Q9HAW9 530 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 XAB2Q9HCS7 855 aaKnown RBP20.17■□□□□ 0.82
HMG20B-213ENST00000488973 LCTP09848 1927 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 USP1O94782 785 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 KLHL2O95198 593 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 TNNC2P02585 160 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 HIRAP54198 1017 aaPredicted RBP20.17■□□□□ 0.82
HMG20B-213ENST00000488973 TARBP2Q15633 366 aaKnown RBP20.17■□□□□ 0.82
HMG20B-213ENST00000488973 C1orf228Q6PIY5 440 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 TIFABQ6ZNK6 161 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 RAPH1Q70E73 1250 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 GSTCDQ8NEC7 633 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 OR6Y1Q8NGX8 325 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 GSDMBQ8TAX9 411 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 OLFM3Q96PB7 478 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 ADPGKQ9BRR6 497 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 CNPY3Q9BT09 278 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 BCO2Q9BYV7 579 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 VCX3BQ9H321 246 aa20.17■□□□□ 0.82
HMG20B-213ENST00000488973 NXF1Q9UBU9 619 aaKnown RBP20.17■□□□□ 0.82
HMG20B-213ENST00000488973 BCLAF3A2AJT9 711 aaKnown RBP20.16■□□□□ 0.82
HMG20B-213ENST00000488973 HMX2A2RU54 273 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 CCNT2O60583 730 aaKnown RBP20.16■□□□□ 0.82
HMG20B-213ENST00000488973 C6orf222P0C671 652 aaPredicted RBP20.16■□□□□ 0.82
HMG20B-213ENST00000488973 PIM1P11309 404 aaPredicted RBP20.16■□□□□ 0.82
HMG20B-213ENST00000488973 TGM2P21980 687 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 XIAPP98170 497 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 TUBB3Q13509 450 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 ST13P4Q8IZP2 240 aaPredicted RBP20.16■□□□□ 0.82
HMG20B-213ENST00000488973 SLC25A41Q8N5S1 370 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 PLD5Q8N7P1 536 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 PIWIL2Q8TC59 973 aaKnown RBP20.16■□□□□ 0.82
HMG20B-213ENST00000488973 JDP2Q8WYK2 163 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 EBF3Q9H4W6 596 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 VCX3AQ9NNX9 186 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 WDR37Q9Y2I8 494 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 SSC5DA1L4H1 1573 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 IGKV6D-21A0A0A0MT36 114 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 RNASEH1O60930 286 aaKnown RBP20.16■□□□□ 0.82
HMG20B-213ENST00000488973 APRTP07741 180 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 GPD1P21695 349 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 CNTFP26441 200 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 MAGEA3P43357 314 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 RAP1GAPP47736 663 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 ERFP50548 548 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 C4orf22Q6V702 233 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 MAP7D3Q8IWC1 876 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 ANKRD36BP1Q96IX9 119 aa20.16■□□□□ 0.82
HMG20B-213ENST00000488973 ZBED1O96006 694 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 RBL1P28749 1068 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 PDE1BQ01064 536 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 PDK2Q15119 407 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 RABGAP1LQ5R372 815 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 FAM102AQ5T9C2 384 aaPredicted RBP20.15■□□□□ 0.82
HMG20B-213ENST00000488973 MROH9Q5TGP6 573 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 MARK2Q7KZI7 788 aaKnown RBP20.15■□□□□ 0.82
HMG20B-213ENST00000488973 RASSF3Q86WH2 238 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 ADGRF2Q8IZF7 708 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 ARHGAP42A6NI28 874 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 WNT10BO00744 389 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 B4GALT4O60513 344 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 ICAM3P32942 547 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 GJA8P48165 433 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 FAXCQ5TGI0 409 aa20.15■□□□□ 0.82
HMG20B-213ENST00000488973 ZCCHC23Q6ZST2 131 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms