RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 ERLEC1Q96DZ1 483 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 CDK5RAP1Q96SZ6 601 aaKnown RBP19.37■□□□□ 0.69
HDAC6-231ENST00000488905 CACNA2D2Q9NY47 1150 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 PLK2Q9NYY3 685 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 CLIC5Q9NZA1 410 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 CYP8B1Q9UNU6 501 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 RAD54BQ9Y620 910 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 USP3Q9Y6I4 520 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 DMXL2Q8TDJ6 3036 aa19.37■□□□□ 0.69
HDAC6-231ENST00000488905 CISD3P0C7P0 127 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 RALAP11233 206 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 ZCWPW2Q504Y3 356 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 ZNF394Q53GI3 561 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 KRT39Q6A163 491 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 ZNF276Q8N554 614 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 P2RY11Q96G91 374 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 HSPA12BQ96MM6 686 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 CAPN10Q9HC96 672 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 FSCN3Q9NQT6 498 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 RASAL2Q9UJF2 1139 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 SLC6A14Q9UN76 642 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 ZNF510Q9Y2H8 683 aa19.36■□□□□ 0.69
HDAC6-231ENST00000488905 C1QTNF9BB2RNN3 333 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 GFRA2O00451 464 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 PENKP01210 267 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-231ENST00000488905 SERPINF2P08697 491 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 C1QTNF9P0C862 333 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 SPINK2P20155 84 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 GTF2H1P32780 548 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 MXI1P50539 228 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 ATXN3P54252 364 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-231ENST00000488905 ADAM9Q13443 819 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 KRBA2Q6ZNG9 492 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 SLC41A1Q8IVJ1 513 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 FAXDC2Q96IV6 333 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 GTPBP2Q9BX10 602 aaKnown RBP19.35■□□□□ 0.69
HDAC6-231ENST00000488905 ADAM33Q9BZ11 813 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 SLC6A17Q9H1V8 727 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 SLC32A1Q9H598 525 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 CD93Q9NPY3 652 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 FBXO10Q9UK96 956 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 ZDHHC9Q9Y397 364 aa19.35■□□□□ 0.69
HDAC6-231ENST00000488905 KLKB1P03952 638 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 CORO1AP31146 461 aaKnown RBP19.34■□□□□ 0.69
HDAC6-231ENST00000488905 GFPT1Q06210 699 aaPredicted RBP19.34■□□□□ 0.69
HDAC6-231ENST00000488905 EDRF1Q3B7T1 1238 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 FYB2Q5VWT5 728 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 PIP4P1Q86T03 277 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 TTC39CQ8N584 583 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 FBXL13Q8NEE6 735 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 SEMA4DQ92854 862 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 MRGPRX1Q96LB2 322 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 HEXIM2Q96MH2 286 aaKnown RBP19.34■□□□□ 0.69
HDAC6-231ENST00000488905 ARID3AQ99856 593 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 GOLPH3LQ9H4A5 285 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 CISHQ9NSE2 258 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 SLC27A6Q9Y2P4 619 aa19.34■□□□□ 0.69
HDAC6-231ENST00000488905 MUC22E2RYF6 1773 aaPredicted RBP19.34■□□□□ 0.69
HDAC6-231ENST00000488905 A0A1W2PQ27 194 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 A0A1W2PQ64 194 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 A0A1W2PQD8 194 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 UPK3BL1B0FP48 263 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 UPK3BL2E5RIL1 263 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 TOP3BO95985 862 aaKnown RBP19.33■□□□□ 0.68
HDAC6-231ENST00000488905 CHKAP35790 457 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 MFAP3P55082 362 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 MCCD1P59942 119 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-231ENST00000488905 COG7P83436 770 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 EFEMP1Q12805 493 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 SEMA3BQ13214 749 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 KIAA1324Q6UXG2 1013 aaKnown RBP19.33■□□□□ 0.68
HDAC6-231ENST00000488905 HDDC3Q8N4P3 179 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 TRIML1Q8N9V2 468 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 SLC4A11Q8NBS3 891 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 TMEM176AQ96HP8 235 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 SCNM1Q9BWG6 230 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 TMEM121BQ9BXQ6 578 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-231ENST00000488905 DCLK3Q9C098 648 aa19.33■□□□□ 0.68
HDAC6-231ENST00000488905 WASH3PC4AMC7 463 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 HMBSP08397 361 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 EPB41P11171 864 aaKnown RBP19.32■□□□□ 0.68
HDAC6-231ENST00000488905 RAD23BP54727 409 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 STARD3Q14849 445 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 GEN1Q17RS7 908 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 RAB41Q5JT25 222 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 ARHGAP17Q68EM7 881 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 PIGZQ86VD9 579 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 SMYD4Q8IYR2 804 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-231ENST00000488905 ARHGAP18Q8N392 663 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 MINDY1Q8N5J2 469 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 EEF2KMTQ96G04 330 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 SCAND2PQ9GZW5 306 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-231ENST00000488905 FAM124BQ9H5Z6 455 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-231ENST00000488905 RAB20Q9NX57 234 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 MARCH2Q9P0N8 246 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 STON1Q9Y6Q2 735 aa19.32■□□□□ 0.68
HDAC6-231ENST00000488905 ARHGAP33O14559 1287 aa19.31■□□□□ 0.68
HDAC6-231ENST00000488905 STX10O60499 249 aa19.31■□□□□ 0.68
HDAC6-231ENST00000488905 OPHN1O60890 802 aa19.31■□□□□ 0.68
HDAC6-231ENST00000488905 NDUFS2O75306 463 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms