RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 SETSIPP0DME0 302 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 VDRP11473 427 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 HOXB2P14652 356 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 GABRG2P18507 467 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 HOXD12P35452 270 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 FMO5P49326 533 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 TKTL1P51854 596 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 PDE4CQ08493 712 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 CETN1Q12798 172 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 EFEMP1Q12805 493 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 E2F5Q15329 346 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 GOLGA7BQ2TAP0 167 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 EGFLAMQ63HQ2 1017 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 TCEAL6Q6IPX3 200 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 SLC36A4Q6YBV0 504 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 SCML4Q8N228 414 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 PGBD3Q8N328 593 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 CPXM2Q8N436 756 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 UBR7Q8N806 425 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 RLN3Q8WXF3 142 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 KCTD13Q8WZ19 329 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 ERCC4Q92889 916 aaPredicted RBP13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 TCEAL3Q969E4 200 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 LSM14BQ9BX40 385 aaKnown RBP13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 ZDHHC4Q9NPG8 344 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 OLA1Q9NTK5 396 aaKnown RBP13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 MARCH2Q9P0N8 246 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 EVLQ9UI08 416 aaPredicted RBP13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 MAN1B1Q9UKM7 699 aa13.7□□□□□ -0.22
ATPAF2-207ENST00000488753 RALGAPA1Q6GYQ0 2036 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 BICDL2A1A5D9 508 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 PRRT4C9JH25 899 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 O00370 1275 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 ZNF217O75362 1048 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 CYBBP04839 570 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 CORO1AP31146 461 aaKnown RBP13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 DHPSP49366 369 aaPredicted RBP13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 ZNF132P52740 706 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 FYB2Q5VWT5 728 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 TTI2Q6NXR4 508 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 TOGARAM2Q6ZUX3 1019 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 BHLHA9Q7RTU4 235 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 SYT12Q8IV01 421 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 FAM217AQ8IXS0 508 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 IPO4Q8TEX9 1081 aaKnown RBP13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 PLD4Q96BZ4 506 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 NT5C1BQ96P26 610 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 ULBP1Q9BZM6 244 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 LRRC4Q9HBW1 653 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 CD248Q9HCU0 757 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 CNGB3Q9NQW8 809 aa13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 MBD1Q9UIS9 605 aaPredicted RBP13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 AGO1Q9UL18 857 aaKnown RBP13.69□□□□□ -0.22
ATPAF2-207ENST00000488753 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 AP5Z1O43299 807 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 CD19P15391 556 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 MFAP3P55082 362 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 ZNF445P59923 1031 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 LMAN2Q12907 356 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 EIF4HQ15056 248 aaKnown RBP13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 STILQ15468 1287 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 TRIP4Q15650 581 aaPredicted RBP13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 CCDC40Q4G0X9 1142 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 PKDCCQ504Y2 493 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 DAB2IPQ5VWQ8 1189 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 PEAR1Q5VY43 1037 aaPredicted RBP13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 LCLAT1Q6UWP7 414 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 TMEFF1Q8IYR6 380 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 SIX6OS1Q8N1H7 587 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 PIGKQ92643 395 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 BHMTQ93088 406 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 IPO9Q96P70 1041 aaKnown RBP13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 SLC2A11Q9BYW1 496 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 CALCOCO1Q9P1Z2 691 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 HBS1LQ9Y450 684 aaKnown RBP13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 CNOT1A5YKK6 2376 aaKnown RBP13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 TPRP12270 2363 aaKnown RBP13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 MYOFQ9NZM1 2061 aa13.68□□□□□ -0.22
ATPAF2-207ENST00000488753 MYH10P35580 1976 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 SLC12A8A0AV02 714 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 TULP2O00295 520 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 LATS1O95835 1130 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 GNA14O95837 355 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 HMBSP08397 361 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 BMP6P22004 513 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 WASP42768 502 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 PTGER3P43115 390 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 HARS2P49590 506 aaKnown RBP13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 ADIGQ0VDE8 80 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 LRMPQ12912 555 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 ENPP2Q13822 863 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 MORC3Q14149 939 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 CNGA2Q16280 664 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 BSPRYQ5W0U4 402 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 LYSMD4Q5XG99 296 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 KIAA1211LQ6NV74 962 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 TMEM270Q6UE05 265 aa13.67□□□□□ -0.22
ATPAF2-207ENST00000488753 RABEPKQ7Z6M1 372 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms