RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ATP11AP98196 1134 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 SYPL2Q5VXT5 272 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 NUGGCQ68CJ6 796 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 HFE2Q6ZVN8 426 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 BNIPLQ7Z465 357 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 NT5DC3Q86UY8 548 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 VSIG1Q86XK7 387 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 TEKT4Q8WW24 435 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 NDRG1Q92597 394 aaKnown RBP11.5□□□□□ -0.57
HDLBP-242ENST00000488013 EDEM1Q92611 657 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 RNF34Q969K3 372 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 NTAN1Q96AB6 310 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 NAPGQ99747 312 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-242ENST00000488013 DDX50Q9BQ39 737 aaKnown RBP11.5□□□□□ -0.57
HDLBP-242ENST00000488013 TASP1Q9H6P5 420 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 WDCPQ9H6R7 721 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 PRDM16Q9HAZ2 1276 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 DONSONQ9NYP3 566 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.5□□□□□ -0.57
HDLBP-242ENST00000488013 GDE1Q9NZC3 331 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 DNMT3BQ9UBC3 853 aaKnown RBP11.5□□□□□ -0.57
HDLBP-242ENST00000488013 USP18Q9UMW8 372 aa11.5□□□□□ -0.57
HDLBP-242ENST00000488013 MRPS23Q9Y3D9 190 aaKnown RBP11.5□□□□□ -0.57
HDLBP-242ENST00000488013 ZFP37Q9Y6Q3 630 aaPredicted RBP11.5□□□□□ -0.57
HDLBP-242ENST00000488013 VWA8A3KMH1 1905 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 A0A0U1RQJ8 604 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 FAM170AA1A519 330 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 TMEM110-MUSTN1A8MSY1 372 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 SOX1O00570 391 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-242ENST00000488013 MDM4O15151 490 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 IRAK2O43187 625 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 LRCH4O75427 683 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 LATS1O95835 1130 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 OLFM2O95897 454 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 OAS1P00973 400 aaKnown RBP11.49□□□□□ -0.57
HDLBP-242ENST00000488013 TCP1P17987 556 aaKnown RBP11.49□□□□□ -0.57
HDLBP-242ENST00000488013 CTNNA2P26232 953 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 MIPP30301 263 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 HTR7P34969 479 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 CTNNA1P35221 906 aaKnown RBP11.49□□□□□ -0.57
HDLBP-242ENST00000488013 AVPR1AP37288 418 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 HARS2P49590 506 aaKnown RBP11.49□□□□□ -0.57
HDLBP-242ENST00000488013 RWDD2BP57060 319 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 SLC7A9P82251 487 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 OGDHQ02218 1023 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 SCAPQ12770 1279 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 EFEMP1Q12805 493 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 NME3Q13232 169 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 ADGRE1Q14246 886 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 TRIP4Q15650 581 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-242ENST00000488013 HABP4Q5JVS0 413 aaKnown RBP11.49□□□□□ -0.57
HDLBP-242ENST00000488013 MEI1Q5TIA1 1274 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 TMC5Q6UXY8 1006 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 GAREM2Q75VX8 874 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 SLC35F6Q8N357 371 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 ATRIPQ8WXE1 791 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 AZIN2Q96A70 460 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 PLD4Q96BZ4 506 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 HES6Q96HZ4 224 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 C16orf45Q96MC5 204 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-242ENST00000488013 HAPLN3Q96S86 360 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 IRX2Q9BZI1 471 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-242ENST00000488013 DCLK3Q9C098 648 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 ZNF334Q9HCZ1 680 aaPredicted RBP11.49□□□□□ -0.57
HDLBP-242ENST00000488013 WDR6Q9NNW5 1121 aaKnown RBP11.49□□□□□ -0.57
HDLBP-242ENST00000488013 RNF14Q9UBS8 474 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 ZNF510Q9Y2H8 683 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 PCDHA3Q9Y5H8 950 aa11.49□□□□□ -0.57
HDLBP-242ENST00000488013 A0A1W2PRU2 124 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 ZNF487B1APH4 448 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 CES2O00748 559 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 COCHO43405 550 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 ZRANB2O95218 330 aaKnown RBP eCLIP11.48□□□□□ -0.57
HDLBP-242ENST00000488013 GJB6O95452 261 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 CKMP06732 381 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 TNNT1P13805 278 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 FSHRP23945 695 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 SLC11A2P49281 568 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 HDAC4P56524 1084 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 TBX4P57082 545 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 COPS2P61201 443 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 ZNF252P-AS1Q0IIN9 211 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 EIF4EBP2Q13542 120 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-242ENST00000488013 PDK2Q15119 407 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 CDO1Q16878 200 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 EFHC2Q5JST6 749 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 PRSS36Q5K4E3 855 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 RARS2Q5T160 578 aaKnown RBP11.48□□□□□ -0.57
HDLBP-242ENST00000488013 ZFYVE27Q5T4F4 411 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 ERMARDQ5T6L9 678 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 TRNP1Q6NT89 227 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 SCYL2Q6P3W7 929 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 SYCE2Q6PIF2 218 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 GRASPQ7Z6J2 395 aaPredicted RBP11.48□□□□□ -0.57
HDLBP-242ENST00000488013 TMEM150AQ86TG1 271 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 TAC4Q86UU9 113 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 KATNAL2Q8IYT4 538 aa11.48□□□□□ -0.57
HDLBP-242ENST00000488013 RCOR2Q8IZ40 523 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms