RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 TMEM51Q9NW97 253 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 IP6K2Q9UHH9 426 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 LSM7Q9UK45 103 aaKnown RBP14.66□□□□□ -0.06
NUP188-207ENST00000487952 ARHGAP26Q9UNA1 814 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 USTQ9Y2C2 406 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 HBS1LQ9Y450 684 aaKnown RBP14.66□□□□□ -0.06
NUP188-207ENST00000487952 SZT2Q5T011 3432 aa14.66□□□□□ -0.06
NUP188-207ENST00000487952 DOCK6Q96HP0 2047 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 A0A0A6YYK5 440 aaPredicted RBP14.65□□□□□ -0.06
NUP188-207ENST00000487952 PJA2O43164 708 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 IRAK2O43187 625 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 ZSCAN12O43309 604 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 MSI1O43347 362 aaKnown RBP14.65□□□□□ -0.06
NUP188-207ENST00000487952 KRT86O43790 486 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 RNF8O76064 485 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 IRF1P10914 325 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 TBX4P57082 545 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 NME3Q13232 169 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 NNTQ13423 1086 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 TRIP4Q15650 581 aaPredicted RBP14.65□□□□□ -0.06
NUP188-207ENST00000487952 IFI16Q16666 785 aaKnown RBP14.65□□□□□ -0.06
NUP188-207ENST00000487952 CCDC14Q49A88 953 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 ARHGAP29Q52LW3 1261 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 TRNP1Q6NT89 227 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 MTSS1LQ765P7 747 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 FNIP1Q8TF40 1166 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 RPGRIP1Q96KN7 1286 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 ZSWIM3Q96MP5 696 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 ASB16Q96NS5 453 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 TBCBQ99426 244 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 SMG9Q9H0W8 520 aaKnown RBP14.65□□□□□ -0.06
NUP188-207ENST00000487952 TDP1Q9NUW8 608 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 TFR2Q9UP52 801 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 PPP2R2CQ9Y2T4 447 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 SH3BP1Q9Y3L3 701 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 PAXBP1Q9Y5B6 917 aa14.65□□□□□ -0.06
NUP188-207ENST00000487952 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.65□□□□□ -0.06
NUP188-207ENST00000487952 RCCD1A6NED2 376 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 TMEM110-MUSTN1A8MSY1 372 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 BTNL10A8MVZ5 291 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 CCP110O43303 1012 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 MTA2O94776 668 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 APOEP02649 317 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 LAMP2P13473 410 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 WEE1P30291 646 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 RDXP35241 583 aaKnown RBP14.64□□□□□ -0.07
NUP188-207ENST00000487952 PITX1P78337 314 aaPredicted RBP14.64□□□□□ -0.07
NUP188-207ENST00000487952 PIGHQ14442 188 aaPredicted RBP14.64□□□□□ -0.07
NUP188-207ENST00000487952 C15orf59Q2T9L4 293 aaPredicted RBP14.64□□□□□ -0.07
NUP188-207ENST00000487952 FAM78AQ5JUQ0 283 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 STRADAQ7RTN6 431 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 PLCD3Q8N3E9 789 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 CELF5Q8N6W0 485 aaKnown RBP14.64□□□□□ -0.07
NUP188-207ENST00000487952 SH3RF2Q8TEC5 729 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 FAM172AQ8WUF8 416 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 USP13Q92995 863 aaPredicted RBP14.64□□□□□ -0.07
NUP188-207ENST00000487952 E2F7Q96AV8 911 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 PLD4Q96BZ4 506 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 BTBD6Q96KE9 485 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 CALR3Q96L12 384 aaKnown RBP14.64□□□□□ -0.07
NUP188-207ENST00000487952 NCAPGQ9BPX3 1015 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 KLF16Q9BXK1 252 aaPredicted RBP14.64□□□□□ -0.07
NUP188-207ENST00000487952 TRIM7Q9C029 511 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 DCLK3Q9C098 648 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 LACRTQ9GZZ8 138 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 ZFP14Q9HCL3 533 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 OSGEPQ9NPF4 335 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 GKN1Q9NS71 199 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 EPS15L1Q9UBC2 864 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 SLC12A6Q9UHW9 1150 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 TLR6Q9Y2C9 796 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 NOTCH4Q99466 2003 aa14.64□□□□□ -0.07
NUP188-207ENST00000487952 C2CD4DB7Z1M9 353 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 LEFTY2O00292 366 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 PRAMEF12O95522 483 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 SLC2A3P11169 496 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 IL9P15248 144 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 CCR1P32246 355 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 SSR1P43307 286 aaKnown RBP14.63□□□□□ -0.07
NUP188-207ENST00000487952 HARS2P49590 506 aaKnown RBP14.63□□□□□ -0.07
NUP188-207ENST00000487952 OGDHQ02218 1023 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 MESDQ14696 234 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 ACAP1Q15027 740 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 TCEAL1Q15170 157 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 NUGGCQ68CJ6 796 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 SCYL2Q6P3W7 929 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 UNC45BQ8IWX7 931 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 NT5C3BQ969T7 300 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 PGAP3Q96FM1 320 aaPredicted RBP14.63□□□□□ -0.07
NUP188-207ENST00000487952 TRPV4Q9HBA0 871 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.63□□□□□ -0.07
NUP188-207ENST00000487952 CFAP97Q9P2B7 532 aa14.63□□□□□ -0.07
NUP188-207ENST00000487952 MACROD2A1Z1Q3 448 aa14.62□□□□□ -0.07
NUP188-207ENST00000487952 HEPACAM2A8MVW5 462 aa14.62□□□□□ -0.07
NUP188-207ENST00000487952 BUB1O43683 1085 aa14.62□□□□□ -0.07
NUP188-207ENST00000487952 PROSCO94903 275 aa14.62□□□□□ -0.07
NUP188-207ENST00000487952 MOCS2O96007 188 aaPredicted RBP14.62□□□□□ -0.07
NUP188-207ENST00000487952 IGLV3-25P01717 112 aa14.62□□□□□ -0.07
NUP188-207ENST00000487952 TCF3P15923 654 aa14.62□□□□□ -0.07
NUP188-207ENST00000487952 TFE3P19532 575 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms