RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CBWD6Q4V339 395 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 CBWD3Q5JTY5 395 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 CBWD5Q5RIA9 395 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 SH3PXD2AQ5TCZ1 1133 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 LYSMD4Q5XG99 296 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 ANKRD40Q6AI12 368 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 TADA2BQ86TJ2 420 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 TTC39CQ8N584 583 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 ANKRD52Q8NB46 1076 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 GABRG3Q99928 467 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 SLC6A17Q9H1V8 727 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 CACNA2D2Q9NY47 1150 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 RASAL2Q9UJF2 1139 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 ZNF510Q9Y2H8 683 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 RAD54BQ9Y620 910 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 IGHV1OR15-9A0A0B4J2B8 117 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 PENKP01210 267 aaPredicted RBP12.8□□□□□ -0.36
VPS16-208ENST00000487461 NDUFV2P19404 249 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 CORO1AP31146 461 aaKnown RBP12.8□□□□□ -0.36
VPS16-208ENST00000487461 RPL6Q02878 288 aaKnown RBP12.8□□□□□ -0.36
VPS16-208ENST00000487461 LMAN2Q12907 356 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 ST3GAL2Q16842 350 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 ZNF658Q5TYW1 1059 aaPredicted RBP12.8□□□□□ -0.36
VPS16-208ENST00000487461 FYB2Q5VWT5 728 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 PEAR1Q5VY43 1037 aaPredicted RBP12.8□□□□□ -0.36
VPS16-208ENST00000487461 PM20D1Q6GTS8 502 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 SLC36A4Q6YBV0 504 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 ZC3H3Q8IXZ2 948 aaKnown RBP12.8□□□□□ -0.36
VPS16-208ENST00000487461 ENGASEQ8NFI3 743 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 ERCC4Q92889 916 aaPredicted RBP12.8□□□□□ -0.36
VPS16-208ENST00000487461 CCDC34Q96HJ3 373 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 CDK5RAP1Q96SZ6 601 aaKnown RBP12.8□□□□□ -0.36
VPS16-208ENST00000487461 NUSAP1Q9BXS6 441 aaKnown RBP12.8□□□□□ -0.36
VPS16-208ENST00000487461 RMND1Q9NWS8 449 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 AGO1Q9UL18 857 aaKnown RBP12.8□□□□□ -0.36
VPS16-208ENST00000487461 CLEC4EQ9ULY5 219 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 CYP8B1Q9UNU6 501 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 SLC27A6Q9Y2P4 619 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 COQ4Q9Y3A0 265 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 LAMA1P25391 3075 aa12.8□□□□□ -0.36
VPS16-208ENST00000487461 ATXN2Q99700 1313 aaKnown RBP12.8□□□□□ -0.36
VPS16-208ENST00000487461 ASCC3Q8N3C0 2202 aaKnown RBP12.79□□□□□ -0.36
VPS16-208ENST00000487461 SLC12A8A0AV02 714 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 GFRA2O00451 464 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 SLC16A3O15427 465 aaKnown RBP12.79□□□□□ -0.36
VPS16-208ENST00000487461 ZBTB24O43167 697 aaPredicted RBP12.79□□□□□ -0.36
VPS16-208ENST00000487461 AP5Z1O43299 807 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 ENGP17813 658 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 CSRP1P21291 193 aaKnown RBP12.79□□□□□ -0.36
VPS16-208ENST00000487461 CHKAP35790 457 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 MAPK8P45983 427 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 TKTL1P51854 596 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 MFAP3P55082 362 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 YWHAGP61981 247 aaKnown RBP eCLIP12.79□□□□□ -0.36
VPS16-208ENST00000487461 FKBP3Q00688 224 aaKnown RBP12.79□□□□□ -0.36
VPS16-208ENST00000487461 ZNF33AQ06730 810 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 PDE4CQ08493 712 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 LRMPQ12912 555 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 CUL2Q13617 745 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 GEN1Q17RS7 908 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 GOLGA7BQ2TAP0 167 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 COBLL1Q53SF7 1204 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 DCAF17Q5H9S7 520 aaPredicted RBP12.79□□□□□ -0.36
VPS16-208ENST00000487461 TCERG1LQ5VWI1 586 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 SLC23A3Q6PIS1 610 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 BHLHA9Q7RTU4 235 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 DENND1CQ8IV53 801 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 SLC41A1Q8IVJ1 513 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 ARHGAP18Q8N392 663 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 SPATA20Q8TB22 786 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 MRGPRX1Q96LB2 322 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 GSDMAQ96QA5 445 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 TSG101Q99816 390 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 DCLK3Q9C098 648 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 FAM124BQ9H5Z6 455 aaPredicted RBP12.79□□□□□ -0.36
VPS16-208ENST00000487461 CD93Q9NPY3 652 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 FSCN3Q9NQT6 498 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 MARCH2Q9P0N8 246 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 STON1Q9Y6Q2 735 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 ZFHX4Q86UP3 3567 aa12.79□□□□□ -0.36
VPS16-208ENST00000487461 TRIM49BA6NDI0 452 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 XPO1O14980 1071 aaKnown RBP12.78□□□□□ -0.36
VPS16-208ENST00000487461 ZNF217O75362 1048 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 ZBED1O96006 694 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 CEACAM1P13688 526 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 PI4KAP42356 2102 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 DPP6P42658 865 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 DUOXA1Q1HG43 343 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 RSRC2Q7L4I2 434 aaKnown RBP12.78□□□□□ -0.36
VPS16-208ENST00000487461 UBR7Q8N806 425 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 DEFB124Q8NES8 71 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 UBA3Q8TBC4 463 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 PIWIL1Q96J94 861 aaKnown RBP12.78□□□□□ -0.36
VPS16-208ENST00000487461 ULBP1Q9BZM6 244 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 THAP10Q9P2Z0 257 aaPredicted RBP12.78□□□□□ -0.36
VPS16-208ENST00000487461 TSPAN16Q9UKR8 245 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 STRIP2Q9ULQ0 834 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 SLC6A14Q9UN76 642 aa12.78□□□□□ -0.36
VPS16-208ENST00000487461 TOP3BO95985 862 aaKnown RBP12.77□□□□□ -0.37
VPS16-208ENST00000487461 CFIP05156 583 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms