RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 VPS50Q96JG6 964 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 PAAF1Q9BRP4 392 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 MECRQ9BV79 373 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 GABRQQ9UN88 632 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 KDM6BO15054 1643 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 M0QZQ0 153 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 EYA2O00167 538 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 CES2O00748 559 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 CA12O43570 354 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 CTGFP29279 349 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 PAPOLAP51003 745 aaKnown RBP5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 DGKQP52824 942 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 SUMO2P61956 95 aaKnown RBP5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 EFR3AQ14156 821 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 RALBP1Q15311 655 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 GALNTL6Q49A17 601 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 PARS2Q7L3T8 475 aaKnown RBP5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 SYT13Q7L8C5 426 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 SIRT6Q8N6T7 355 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 IL17REQ8NFR9 667 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 ASB12Q8WXK4 309 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 CPT1BQ92523 772 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 SDCCAG3Q96C92 435 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 PRR11Q96HE9 360 aaPredicted RBP5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 COG8Q96MW5 612 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 TWSG1Q9GZX9 223 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 CCDC134Q9H6E4 229 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 CHODLQ9H9P2 273 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 ARHGEF3Q9NR81 526 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 PDP2Q9P2J9 529 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 MGAT4CQ9UBM8 478 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 KCND3Q9UK17 655 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 GJD2Q9UKL4 321 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 PNMA2Q9UL42 364 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 NFU1Q9UMS0 254 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 CRYL1Q9Y2S2 319 aa5.65□□□□□ -1.5
PRPF38A-203ENST00000487160 CUX1P39880 1505 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 DIP2BQ9P265 1576 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 LOC105369274A0A096LPK9 316 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 LOC102723532A0A0G2JNH3 316 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 M0QYT0 321 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 TK1P04183 234 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 HKR1P10072 659 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 ALADP13716 330 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 PCSK6P29122 969 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 SERPINA4P29622 427 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 CYP2C18P33260 490 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 SEC24CP53992 1094 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 TPTEP56180 551 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 ACTR2P61160 394 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 BLOC1S1P78537 153 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 SF3A3Q12874 501 aaKnown RBP eCLIP5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 NBPF8Q3BBV2 869 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 ZNF569Q5MCW4 686 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 JAKMIP3Q5VZ66 844 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 Q6ZWC4 215 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 KRT27Q7Z3Y8 459 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 LRRTM4Q86VH4 590 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 CPOQ8IVL8 374 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 OR4N4Q8N0Y3 316 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 TEX19Q8NA77 164 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 OVCA2Q8WZ82 227 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 MMRN2Q9H8L6 949 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 FBXO28Q9NVF7 368 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 DLL3Q9NYJ7 618 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 NDUFAF4Q9P032 175 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 ZNF69Q9UC07 566 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 ZBTB1Q9Y2K1 713 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 MAST3O60307 1309 aa5.64□□□□□ -1.51
PRPF38A-203ENST00000487160 ADAMTS12P58397 1594 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 A0A1B0GVC2 190 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 GXYLT2A0PJZ3 443 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 TISP43B9A030 160 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 LARGE1O95461 756 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 CYP21A2P08686 494 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 DLDP09622 509 aaKnown RBP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 ENGP17813 658 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 ADRA1DP25100 572 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 SMAD1Q15797 465 aaKnown RBP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 SLC4A8Q2Y0W8 1093 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 PLAC9Q5JTB6 97 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 ANKRD40Q6AI12 368 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 TMED8Q6PL24 325 aaPredicted RBP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 PTCHD4Q6ZW05 846 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 USP51Q70EK9 711 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 ZNF551Q7Z340 670 aaPredicted RBP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 PEG10Q86TG7 708 aaKnown RBP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 RP9Q8TA86 221 aaKnown RBP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 HERVK_113Q902F9 699 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 REXO5Q96IC2 774 aaKnown RBP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 MAELQ96JY0 434 aaKnown RBP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 LENG8Q96PV6 779 aaPredicted RBP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 KRTAP4-12Q9BQ66 201 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 SAP30LQ9HAJ7 183 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 G6PC2Q9NQR9 355 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 RXFP3Q9NSD7 469 aa5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 LIN7CQ9NUP9 197 aaKnown RBP5.63□□□□□ -1.51
PRPF38A-203ENST00000487160 SYBUQ9NX95 663 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms