RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 NUP93Q8N1F7 819 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 SCLYQ96I15 445 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 SPATA17Q96L03 361 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 KCTD15Q96SI1 283 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-207ENST00000486868 TMEM209Q96SK2 561 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 ROPN1BQ9BZX4 212 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-207ENST00000486868 BRD8Q9H0E9 1235 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 RAB6CQ9H0N0 254 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 OSBPL2Q9H1P3 480 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 ADAM7Q9H2U9 754 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 DHX35Q9H5Z1 703 aaKnown RBP12.08□□□□□ -0.48
PRKCB-207ENST00000486868 C11orf49Q9H6J7 331 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 ROPN1Q9HAT0 212 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-207ENST00000486868 TMEM39AQ9NV64 488 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 PSD3Q9NYI0 1048 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 STK39Q9UEW8 545 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 NAALADL1Q9UQQ1 740 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 PLAAQ9Y263 795 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 BACE2Q9Y5Z0 518 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 TDRD15B5MCY1 1934 aaKnown RBP12.07□□□□□ -0.48
PRKCB-207ENST00000486868 GOLGA6L10A6NI86 522 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 HMGB1P1B2RPK0 211 aaPredicted RBP12.07□□□□□ -0.48
PRKCB-207ENST00000486868 F8W810 466 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 SGK1O00141 431 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 RNF40O75150 1001 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 TCEA3O75764 348 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 RTN3O95197 1032 aaPredicted RBP12.07□□□□□ -0.48
PRKCB-207ENST00000486868 NCAM1P13591 858 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 PECAM1P16284 738 aaPredicted RBP12.07□□□□□ -0.48
PRKCB-207ENST00000486868 TSHRP16473 764 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 MAGEA6P43360 314 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 PSEN1P49768 467 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 SLC5A3P53794 718 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 CCL23P55773 120 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 MTA1Q13330 715 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 PAFAH1B3Q15102 231 aaKnown RBP12.07□□□□□ -0.48
PRKCB-207ENST00000486868 P3H1Q32P28 736 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 SLC39A12Q504Y0 691 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 RNASEH2BQ5TBB1 312 aaKnown RBP12.07□□□□□ -0.48
PRKCB-207ENST00000486868 DENND2CQ68D51 928 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 MSANTD2Q6P1R3 559 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 FAM131BQ86XD5 332 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 ZNF276Q8N554 614 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 CCDC185Q8N715 623 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 SLC7A14Q8TBB6 771 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 NDRG1Q92597 394 aaKnown RBP12.07□□□□□ -0.48
PRKCB-207ENST00000486868 TOP1MTQ969P6 601 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 ZNF689Q96CS4 500 aaPredicted RBP12.07□□□□□ -0.48
PRKCB-207ENST00000486868 TMEM121Q9BTD3 319 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 TTPALQ9BTX7 342 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 GPR62Q9BZJ7 368 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 EPB41L4BQ9H329 900 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 USP29Q9HBJ7 922 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 TMBIM4Q9HC24 238 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 AAASQ9NRG9 546 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 GPATCH2LQ9NWQ4 482 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 CWC15Q9P013 229 aaKnown RBP12.07□□□□□ -0.48
PRKCB-207ENST00000486868 PAK5Q9P286 719 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 ATP8A1Q9Y2Q0 1164 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
PRKCB-207ENST00000486868 TSC2P49815 1807 aa12.07□□□□□ -0.48
PRKCB-207ENST00000486868 NCAM2O15394 837 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 BAIAP3O94812 1187 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 TTC4O95801 387 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 TIMP1P01033 207 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 ABHD2P08910 425 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 MYZAPP0CAP1 466 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 HSPA8P11142 646 aaKnown RBP12.06□□□□□ -0.48
PRKCB-207ENST00000486868 ACTN2P35609 894 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 ALDH7A1P49419 539 aaKnown RBP12.06□□□□□ -0.48
PRKCB-207ENST00000486868 ATXN1P54253 815 aaKnown RBP12.06□□□□□ -0.48
PRKCB-207ENST00000486868 YWHAGP61981 247 aaKnown RBP eCLIP12.06□□□□□ -0.48
PRKCB-207ENST00000486868 RPL10AP62906 217 aaKnown RBP12.06□□□□□ -0.48
PRKCB-207ENST00000486868 DYNLT1P63172 113 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 NRG1Q02297 640 aaPredicted RBP12.06□□□□□ -0.48
PRKCB-207ENST00000486868 GPS1Q13098 491 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 DPYSQ14117 519 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 PPP2R5DQ14738 602 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 USP41Q3LFD5 358 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 SLC45A4Q5BKX6 768 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 BTBD8Q5XKL5 378 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 SLC8B1Q6J4K2 584 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 DARS2Q6PI48 645 aaKnown RBP12.06□□□□□ -0.48
PRKCB-207ENST00000486868 PPP1R21Q6ZMI0 780 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 PPIL6Q8IXY8 311 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 DNAJC5GQ8N7S2 189 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 DQX1Q8TE96 717 aaKnown RBP12.06□□□□□ -0.48
PRKCB-207ENST00000486868 RNF139Q8WU17 664 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 UBLCP1Q8WVY7 318 aaPredicted RBP12.06□□□□□ -0.48
PRKCB-207ENST00000486868 EXOC4Q96A65 974 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 VWCEQ96DN2 955 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 TTC25Q96NG3 672 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 OLFM3Q96PB7 478 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 HAPLN3Q96S86 360 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 FERMT1Q9BQL6 677 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 SMOC2Q9H3U7 446 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 CWH43Q9H720 699 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 PPCSQ9HAB8 311 aa12.06□□□□□ -0.48
PRKCB-207ENST00000486868 PIGVQ9NUD9 493 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms