RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SLC8A1P32418 973 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 SLC10A2Q12908 348 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 MFSD10Q14728 455 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 SNX17Q15036 470 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 FYB2Q5VWT5 728 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 VPS52Q8N1B4 723 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 KIF2BQ8N4N8 673 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 APPL2Q8NEU8 664 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 ZNF398Q8TD17 642 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 TMEM40Q8WWA1 233 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 DNAJB3Q8WWF6 145 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 QKIQ96PU8 341 aaKnown RBP eCLIP18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 CSPG4P5Q96PW8 444 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 KCTD15Q96SI1 283 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 C12orf65Q9H3J6 166 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 MANSC1Q9H8J5 431 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 CREBZFQ9NS37 354 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 SLC5A4Q9NY91 659 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 KLK14Q9P0G3 267 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 ZNF180Q9UJW8 692 aa18.64■□□□□ 0.57
PDLIM7-207ENST00000486828 ZNF236Q9UL36 1845 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 WDR91A4D1P6 747 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 CAPN15O75808 1086 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 FAM155BO75949 473 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 DHRS4L1P0CG22 281 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 MAGEA3P43357 314 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 TAF6P49848 677 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 ADAM17P78536 824 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 HIC1Q14526 733 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 ZNF618Q5T7W0 954 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 TTC39BQ5VTQ0 682 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 STRADAQ7RTN6 431 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 CHSY1Q86X52 802 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 SLC2A14Q8TDB8 520 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 LRRN4Q8WUT4 740 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 HHIPL1Q96JK4 782 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 PLAC1Q9HBJ0 212 aa18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.63■□□□□ 0.57
PDLIM7-207ENST00000486828 METTL18O95568 372 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 KRT16P08779 473 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 SLC10A3P09131 477 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 TPSB2P20231 275 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 ETV4P43268 484 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 TPSAB1Q15661 275 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 SV2CQ496J9 727 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 UBXN11Q5T124 520 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 LRRC6Q86X45 466 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 CCDC185Q8N715 623 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 PPM1NQ8N819 430 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 MAGEB5Q9BZ81 275 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 TRIM33Q9UPN9 1127 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 C2CD2LO14523 706 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 XPO1O14980 1071 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 TROVE2P10155 538 aaKnown RBP eCLIP18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 PYGBP11216 843 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 EFHC1Q5JVL4 640 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 SPDYAQ5MJ70 313 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 PRAMEF19Q5SWL8 479 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 NCBP2-AS2Q69YL0 99 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 KCNT2Q6UVM3 1135 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 ZNF534Q76KX8 674 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 CTAGE3PQ8IX95 158 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 TNIP3Q96KP6 325 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 NPHS2Q9NP85 383 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 USP3Q9Y6I4 520 aa18.62■□□□□ 0.57
PDLIM7-207ENST00000486828 FAM155AB1AL88 458 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 KRT37O76014 449 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 APOEP02649 317 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 MATKP42679 507 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 SOX4Q06945 474 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 IRF5Q13568 498 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 PREPLQ4J6C6 727 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 WLSQ5T9L3 541 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 TLK2Q86UE8 772 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 ADGRF2Q8IZF7 708 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 GOLGA2P5Q9HBQ8 144 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 DTLQ9NZJ0 730 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 CXorf49A8MYA2 514 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 TRIM49D1C9J1S8 452 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 HAS3O00219 553 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 HUS1O60921 280 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 SNRPAP09012 282 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 WARSP23381 471 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 TKTP29401 623 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 PSEN2P49810 448 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 SEMA5AQ13591 1074 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 HEATR6Q6AI08 1181 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 UNC5AQ6ZN44 842 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 NLRP9Q7RTR0 991 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 APBB2Q92870 758 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 PTPRN2Q92932 1015 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 SIGLEC10Q96LC7 697 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 FAM111AQ96PZ2 611 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 PTPN18Q99952 460 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 LRMDAQ9H2I8 198 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 RCOR3Q9P2K3 495 aaPredicted RBP18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 FZD10Q9ULW2 581 aa18.61■□□□□ 0.57
PDLIM7-207ENST00000486828 HACD1B0YJ81 288 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 TREHO43280 583 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms