RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 TRIM49P0CI25 452 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 TRIM49CP0CI26 452 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 CD59P13987 128 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 PFKFB1P16118 471 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 CMA1P23946 247 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 CCDC186Q7Z3E2 898 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 RGL4Q8IZJ4 473 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 ZNF276Q8N554 614 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 DUSP16Q9BY84 665 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 NEUROG3Q9Y4Z2 214 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 USP3Q9Y6I4 520 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 STON1Q9Y6Q2 735 aa19.73■□□□□ 0.75
GMDS-205ENST00000486793 TMEM8BA6NDV4 472 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 MAPK13O15264 365 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 SYPP08247 313 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 NR2F2P24468 414 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 PSEN1P49768 467 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 ZNF394Q53GI3 561 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 PPP1R26Q5T8A7 1209 aaPredicted RBP19.72■□□□□ 0.75
GMDS-205ENST00000486793 KIAA1324Q6UXG2 1013 aaKnown RBP19.72■□□□□ 0.75
GMDS-205ENST00000486793 INTS8Q75QN2 995 aaKnown RBP19.72■□□□□ 0.75
GMDS-205ENST00000486793 TADA2BQ86TJ2 420 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 NUP205Q92621 2012 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 HEXIM2Q96MH2 286 aaKnown RBP19.72■□□□□ 0.75
GMDS-205ENST00000486793 NIF3L1Q9GZT8 377 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 FAM124BQ9H5Z6 455 aaPredicted RBP19.72■□□□□ 0.75
GMDS-205ENST00000486793 MMRN2Q9H8L6 949 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 CLIC5Q9NZA1 410 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 USP25Q9UHP3 1055 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 KLK13Q9UKR3 277 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 MAPK8IP1Q9UQF2 711 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 ZNF510Q9Y2H8 683 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 SLC27A6Q9Y2P4 619 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 MSRB2Q9Y3D2 182 aa19.72■□□□□ 0.75
GMDS-205ENST00000486793 ASCC3Q8N3C0 2202 aaKnown RBP19.71■□□□□ 0.75
GMDS-205ENST00000486793 PENKP01210 267 aaPredicted RBP19.71■□□□□ 0.75
GMDS-205ENST00000486793 MYL1P05976 194 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 HMBSP08397 361 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 RALAP11233 206 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 MAOBP27338 520 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 COG7P83436 770 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 PLEKHG6Q3KR16 790 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 SYCP2LQ5T4T6 812 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 FYB2Q5VWT5 728 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 FAM186BQ8IYM0 893 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 SPRYD3Q8NCJ5 442 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 DNAAF2Q9NVR5 837 aaKnown RBP19.71■□□□□ 0.75
GMDS-205ENST00000486793 HPSEQ9Y251 543 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 FAM208BQ5VWN6 2430 aa19.71■□□□□ 0.75
GMDS-205ENST00000486793 SRRM3A6NNA2 597 aaPredicted RBP19.7■□□□□ 0.74
GMDS-205ENST00000486793 H0Y626 953 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 TRIM16O95361 564 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 KRT13P13646 458 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 CD6P30203 668 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 CHKAP35790 457 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 MFAP3P55082 362 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 EFEMP1Q12805 493 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 NFIL3Q16649 462 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 GEN1Q17RS7 908 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 FUT11Q495W5 492 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 WDR45BQ5MNZ6 344 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 METTL3Q86U44 580 aaKnown RBP19.7■□□□□ 0.74
GMDS-205ENST00000486793 HSCBQ8IWL3 235 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 CHCHD4Q8N4Q1 142 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 FOXJ1Q92949 421 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 TOE1Q96GM8 510 aaKnown RBP19.7■□□□□ 0.74
GMDS-205ENST00000486793 CAMK1GQ96NX5 476 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 CDK5RAP1Q96SZ6 601 aaKnown RBP19.7■□□□□ 0.74
GMDS-205ENST00000486793 PRDM16Q9HAZ2 1276 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 RASAL2Q9UJF2 1139 aa19.7■□□□□ 0.74
GMDS-205ENST00000486793 WDFY3Q8IZQ1 3526 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 SH3BP5O60239 455 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 RHOBTB3O94955 611 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 PRR29P0C7W0 189 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 CORO1AP31146 461 aaKnown RBP19.69■□□□□ 0.74
GMDS-205ENST00000486793 RDXP35241 583 aaKnown RBP19.69■□□□□ 0.74
GMDS-205ENST00000486793 PSMC2P35998 433 aaKnown RBP19.69■□□□□ 0.74
GMDS-205ENST00000486793 IL12RB1P42701 662 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 ADAM9Q13443 819 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 STARD3Q14849 445 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 CCDC150Q8NCX0 1101 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 ZCCHC14Q8WYQ9 949 aaKnown RBP19.69■□□□□ 0.74
GMDS-205ENST00000486793 DCLK3Q9C098 648 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 DNAI2Q9GZS0 605 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 MKRN2Q9H000 416 aaKnown RBP19.69■□□□□ 0.74
GMDS-205ENST00000486793 ITM2CQ9NQX7 267 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 WSB2Q9NYS7 404 aaPredicted RBP19.69■□□□□ 0.74
GMDS-205ENST00000486793 THAP10Q9P2Z0 257 aaPredicted RBP19.69■□□□□ 0.74
GMDS-205ENST00000486793 SUSD2Q9UGT4 822 aa19.69■□□□□ 0.74
GMDS-205ENST00000486793 AGO1Q9UL18 857 aaKnown RBP19.69■□□□□ 0.74
GMDS-205ENST00000486793 GJB3O75712 270 aa19.68■□□□□ 0.74
GMDS-205ENST00000486793 GNSP15586 552 aa19.68■□□□□ 0.74
GMDS-205ENST00000486793 SLC14A1Q13336 389 aa19.68■□□□□ 0.74
GMDS-205ENST00000486793 HNRNPDQ14103 355 aaKnown RBP19.68■□□□□ 0.74
GMDS-205ENST00000486793 DENND1CQ8IV53 801 aa19.68■□□□□ 0.74
GMDS-205ENST00000486793 SEMA4DQ92854 862 aa19.68■□□□□ 0.74
GMDS-205ENST00000486793 PIWIL1Q96J94 861 aaKnown RBP19.68■□□□□ 0.74
GMDS-205ENST00000486793 UBXN6Q9BZV1 441 aa19.68■□□□□ 0.74
GMDS-205ENST00000486793 TMEM8AQ9HCN3 771 aa19.68■□□□□ 0.74
GMDS-205ENST00000486793 CLEC4EQ9ULY5 219 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms