RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 CYP27A1Q02318 531 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 GRIN1Q05586 938 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 IFRD2Q12894 506 aaPredicted RBP10.24□□□□□ -0.77
PTPN7-213ENST00000486116 MAPK8IP2Q13387 824 aaPredicted RBP10.24□□□□□ -0.77
PTPN7-213ENST00000486116 ZNF234Q14588 700 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 GEN1Q17RS7 908 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 SOWAHAQ2M3V2 549 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 ARL13BQ3SXY8 428 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 TDRD10Q5VZ19 366 aaKnown RBP10.24□□□□□ -0.77
PTPN7-213ENST00000486116 HTR3DQ70Z44 454 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 CXorf38Q8TB03 319 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 BHMTQ93088 406 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 PCED1BQ96HM7 432 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 FAM84AQ96KN4 292 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 C8orf48Q96LL4 319 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 SLITRK1Q96PX8 696 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 MMS19Q96T76 1030 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 LHX5Q9H2C1 402 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 THSD1Q9NS62 852 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 GDAP2Q9NXN4 497 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 WDR35Q9P2L0 1181 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 ORC3Q9UBD5 711 aaPredicted RBP10.24□□□□□ -0.77
PTPN7-213ENST00000486116 FBXO10Q9UK96 956 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 AGAP1Q9UPQ3 857 aa10.24□□□□□ -0.77
PTPN7-213ENST00000486116 ZFC3H1O60293 1989 aaKnown RBP10.24□□□□□ -0.77
PTPN7-213ENST00000486116 SPENQ96T58 3664 aaKnown RBP10.24□□□□□ -0.77
PTPN7-213ENST00000486116 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 A0A1W2PNU3 283 aaPredicted RBP10.23□□□□□ -0.77
PTPN7-213ENST00000486116 PP2D1A8MPX8 630 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 ANKRD63C9JTQ0 380 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 WNT9AO14904 365 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 NPC1O15118 1278 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 YKT6O15498 198 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 EFSO43281 561 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 FAM87AP0C7U9 286 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 C7P10643 843 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 BCAT1P54687 386 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 CDH8P55286 799 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 E2F1Q01094 437 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 CLN3Q13286 438 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 ZNF174Q15697 407 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 HECTD3Q5T447 861 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 IGF2-ASQ6U949 168 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 XKR5Q6UX68 686 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 CRELD2Q6UXH1 353 aaPredicted RBP10.23□□□□□ -0.77
PTPN7-213ENST00000486116 TOP6BLQ8N6T0 577 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 C1orf127Q8N9H9 656 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 RBBP8NLQ8NC74 664 aaPredicted RBP10.23□□□□□ -0.77
PTPN7-213ENST00000486116 KBTBD7Q8WVZ9 684 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 EXTL1Q92935 676 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 BTBD1Q9H0C5 482 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 EBF2Q9HAK2 575 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 ZSWIM6Q9HCJ5 1215 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 PLK2Q9NYY3 685 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 KCNG1Q9UIX4 513 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 SLC27A6Q9Y2P4 619 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 SNX9Q9Y5X1 595 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 LRRK1Q38SD2 2015 aa10.23□□□□□ -0.77
PTPN7-213ENST00000486116 CSMD1Q96PZ7 3565 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 A0A1W2PPC4 97 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 A0A1W2PR77 199 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 H0YCG3 227 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 CSO75390 466 aaKnown RBP10.22□□□□□ -0.77
PTPN7-213ENST00000486116 EPHX1P07099 455 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 PLCG1P19174 1290 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 FOSBP53539 338 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 MFAP3P55082 362 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 SNX30Q5VWJ9 437 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 KIAA0895LQ68EN5 471 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 LRRC52Q8N7C0 313 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 C4orf32Q8N8J7 132 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 IGSF22Q8N9C0 903 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 PDZD8Q8NEN9 1154 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 OR2T3Q8NH03 318 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 SORCS1Q8WY21 1168 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 WASF1Q92558 559 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 FBXO32Q969P5 355 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 DEPDC7Q96QD5 511 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 SEMA3CQ99985 751 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 CHORDC1Q9UHD1 332 aaPredicted RBP10.22□□□□□ -0.77
PTPN7-213ENST00000486116 CDH9Q9ULB4 789 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 NME7Q9Y5B8 376 aa10.22□□□□□ -0.77
PTPN7-213ENST00000486116 TRIM38O00635 465 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 OPA1O60313 960 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 POU3F2P20265 443 aaPredicted RBP10.21□□□□□ -0.77
PTPN7-213ENST00000486116 YWHAQP27348 245 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 ARRB1P49407 418 aaPredicted RBP10.21□□□□□ -0.77
PTPN7-213ENST00000486116 PGFP49763 221 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 TUBP50607 506 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 ASIC1P78348 528 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 FOXK1P85037 733 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 CAMK2GQ13555 558 aaPredicted RBP10.21□□□□□ -0.77
PTPN7-213ENST00000486116 MAPRE1Q15691 268 aaKnown RBP10.21□□□□□ -0.77
PTPN7-213ENST00000486116 IGFBP7Q16270 282 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 ZSCAN23Q3MJ62 389 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 BMP2KLQ5H9B9 411 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 MDH1BQ5I0G3 518 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 ADALQ6DHV7 355 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 LIMS2Q7Z4I7 341 aa10.21□□□□□ -0.77
PTPN7-213ENST00000486116 NT5DC4Q86YG4 428 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms