RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 NUDT5Q9UKK9 219 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 MYO18AQ92614 2054 aaKnown RBP12.03□□□□□ -0.48
SCFD1-206ENST00000484733 SDK1Q7Z5N4 2213 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 IGHV1OR15-9A0A0B4J2B8 117 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 UPK3BL1B0FP48 263 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 UPK3BL2E5RIL1 263 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 CEACAM1P13688 526 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 PTGER3P43115 390 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 SLC8A3P57103 927 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 YWHAEP62258 255 aaKnown RBP12.03□□□□□ -0.48
SCFD1-206ENST00000484733 PNOCQ13519 176 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 ENPP2Q13822 863 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 DUOXA1Q1HG43 343 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 TRIM61Q5EBN2 209 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 PSAPL1Q6NUJ1 521 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 PIGZQ86VD9 579 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 FAM217AQ8IXS0 508 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 CHPFQ8IZ52 775 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 SCML4Q8N228 414 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 CEP192Q8TEP8 1941 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 ACOX2Q99424 681 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 TMEM74BQ9NUR3 256 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 RASAL2Q9UJF2 1139 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 KIAA1257Q9ULG3 409 aa12.03□□□□□ -0.48
SCFD1-206ENST00000484733 XPO1O14980 1071 aaKnown RBP12.02□□□□□ -0.49
SCFD1-206ENST00000484733 KCNA4P22459 653 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 YWHAGP61981 247 aaKnown RBP eCLIP12.02□□□□□ -0.49
SCFD1-206ENST00000484733 FKBP3Q00688 224 aaKnown RBP12.02□□□□□ -0.49
SCFD1-206ENST00000484733 ST3GAL2Q16842 350 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 SMYD4Q8IYR2 804 aaPredicted RBP12.02□□□□□ -0.49
SCFD1-206ENST00000484733 UBR7Q8N806 425 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 PLD4Q96BZ4 506 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 TIGD1Q96MW7 591 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 SLC2A11Q9BYW1 496 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 STRIP2Q9ULQ0 834 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 SLC6A14Q9UN76 642 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 PMM2O15305 246 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 SMC2O95347 1197 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 NDUFV2P19404 249 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 CORO1AP31146 461 aaKnown RBP12.02□□□□□ -0.49
SCFD1-206ENST00000484733 WASP42768 502 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 NOVA1P51513 510 aaKnown RBP12.02□□□□□ -0.49
SCFD1-206ENST00000484733 LRRC63Q05C16 580 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 EFEMP1Q12805 493 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 CUL2Q13617 745 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 CBWD6Q4V339 395 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 CBWD3Q5JTY5 395 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 CBWD5Q5RIA9 395 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 ANKRD40Q6AI12 368 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 KIAA1211LQ6NV74 962 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 ELOA2Q8IYF1 753 aaPredicted RBP12.02□□□□□ -0.49
SCFD1-206ENST00000484733 P2RY11Q96G91 374 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 OLA1Q9NTK5 396 aaKnown RBP12.02□□□□□ -0.49
SCFD1-206ENST00000484733 MARCH2Q9P0N8 246 aa12.02□□□□□ -0.49
SCFD1-206ENST00000484733 THAP10Q9P2Z0 257 aaPredicted RBP12.02□□□□□ -0.49
SCFD1-206ENST00000484733 AGO1Q9UL18 857 aaKnown RBP12.02□□□□□ -0.49
SCFD1-206ENST00000484733 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
SCFD1-206ENST00000484733 ZBED1O96006 694 aa12.01□□□□□ -0.49
SCFD1-206ENST00000484733 SERPINF2P08697 491 aa12.01□□□□□ -0.49
SCFD1-206ENST00000484733 ENGP17813 658 aa12.01□□□□□ -0.49
SCFD1-206ENST00000484733 BCAT1P54687 386 aa12.01□□□□□ -0.49
SCFD1-206ENST00000484733 MFAP3P55082 362 aa12.01□□□□□ -0.49
SCFD1-206ENST00000484733 RPL6Q02878 288 aaKnown RBP12.01□□□□□ -0.49
SCFD1-206ENST00000484733 TRIP4Q15650 581 aaPredicted RBP12.01□□□□□ -0.49
SCFD1-206ENST00000484733 SH3PXD2AQ5TCZ1 1133 aa12.01□□□□□ -0.49
SCFD1-206ENST00000484733 ARMCX6Q7L4S7 300 aa12.01□□□□□ -0.49
SCFD1-206ENST00000484733 BHLHA9Q7RTU4 235 aa12.01□□□□□ -0.49
SCFD1-206ENST00000484733 KCTD13Q8WZ19 329 aa12.01□□□□□ -0.49
SCFD1-206ENST00000484733 ZNF419Q96HQ0 510 aaPredicted RBP12.01□□□□□ -0.49
SCFD1-206ENST00000484733 PIWIL1Q96J94 861 aaKnown RBP12.01□□□□□ -0.49
SCFD1-206ENST00000484733 ARID3AQ99856 593 aa12.01□□□□□ -0.49
SCFD1-206ENST00000484733 GDPD2Q9HCC8 539 aa12.01□□□□□ -0.49
SCFD1-206ENST00000484733 CYBBP04839 570 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 VDRP11473 427 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 ITPKAP23677 461 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 TBXAS1P24557 533 aaPredicted RBP12□□□□□ -0.49
SCFD1-206ENST00000484733 TKTL1P51854 596 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 ZNF33AQ06730 810 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 BST2Q10589 180 aaKnown RBP12□□□□□ -0.49
SCFD1-206ENST00000484733 GOLGA7BQ2TAP0 167 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 SGO2Q562F6 1265 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 RBBP8NLQ8NC74 664 aaPredicted RBP12□□□□□ -0.49
SCFD1-206ENST00000484733 UCMAQ8WVF2 138 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 MRGPRX1Q96LB2 322 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 CAPN10Q9HC96 672 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 METTL14Q9HCE5 456 aaKnown RBP12□□□□□ -0.49
SCFD1-206ENST00000484733 WASF3Q9UPY6 502 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 HBS1LQ9Y450 684 aaKnown RBP12□□□□□ -0.49
SCFD1-206ENST00000484733 STON1Q9Y6Q2 735 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 SLC12A8A0AV02 714 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 GIPC1O14908 333 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 TIMM44O43615 452 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 LATS1O95835 1130 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 PPP1R2P41236 205 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 ZNF445P59923 1031 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 PDE4CQ08493 712 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 EIF4HQ15056 248 aaKnown RBP12□□□□□ -0.49
SCFD1-206ENST00000484733 TCERG1LQ5VWI1 586 aa12□□□□□ -0.49
SCFD1-206ENST00000484733 FOXR2Q6PJQ5 311 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms