RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 PTGER1P34995 402 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 SLC35G1Q2M3R5 365 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 CNGA4Q8IV77 575 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 CCAR1Q8IX12 1150 aaKnown RBP5.76□□□□□ -1.49
CCDC66-219ENST00000484441 OR2C3Q8N628 320 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 FAM71DQ8N9W8 422 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 DENND1AQ8TEH3 1009 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 RNF26Q9BY78 433 aaPredicted RBP5.76□□□□□ -1.49
CCDC66-219ENST00000484441 PCGF6Q9BYE7 350 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 PCDHAC1Q9H158 963 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 VPS16Q9H269 839 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 USP29Q9HBJ7 922 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 RGL1Q9NZL6 768 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 ZMYND8Q9ULU4 1186 aaPredicted RBP5.76□□□□□ -1.49
CCDC66-219ENST00000484441 MAN2B2Q9Y2E5 1009 aa5.76□□□□□ -1.49
CCDC66-219ENST00000484441 NCK2O43639 380 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 CNOT3O75175 753 aaKnown RBP5.75□□□□□ -1.49
CCDC66-219ENST00000484441 NDST3O95803 873 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 JAK3P52333 1124 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 TBX4P57082 545 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 RAE1P78406 368 aaKnown RBP5.75□□□□□ -1.49
CCDC66-219ENST00000484441 SRSF1Q07955 248 aaKnown RBP eCLIP5.75□□□□□ -1.49
CCDC66-219ENST00000484441 ARL13BQ3SXY8 428 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 FAM209BQ5JX69 171 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 UBE2Q1Q7Z7E8 422 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 P3H2Q8IVL5 708 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 Q8N9P0 234 aaPredicted RBP5.75□□□□□ -1.49
CCDC66-219ENST00000484441 GLIS1Q8NBF1 620 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 CCDC150Q8NCX0 1101 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 ZNF48Q96MX3 618 aaPredicted RBP5.75□□□□□ -1.49
CCDC66-219ENST00000484441 NUDT22Q9BRQ3 303 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 GATA5Q9BWX5 397 aaPredicted RBP5.75□□□□□ -1.49
CCDC66-219ENST00000484441 ARNT2Q9HBZ2 717 aa5.75□□□□□ -1.49
CCDC66-219ENST00000484441 PPEF2O14830 753 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 HARSP12081 509 aaKnown RBP5.74□□□□□ -1.49
CCDC66-219ENST00000484441 IDEP14735 1019 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 DUSP1P28562 367 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 WDR5P61964 334 aaKnown RBP5.74□□□□□ -1.49
CCDC66-219ENST00000484441 GHRHRQ02643 423 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 MAPKAPK3Q16644 382 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 LONRF1Q17RB8 773 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 C10orf25Q5T742 122 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 CCSAPQ6IQ19 270 aaPredicted RBP5.74□□□□□ -1.49
CCDC66-219ENST00000484441 ANO7Q6IWH7 933 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 OVCA2Q8WZ82 227 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 RIPOR3Q96MK2 946 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 SIGLEC11Q96RL6 698 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 ADGRE3Q9BY15 652 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 KRTAP9-8Q9BYQ0 159 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 NECTIN3Q9NQS3 549 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 ABHD10Q9NUJ1 306 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 PHTF1Q9UMS5 762 aa5.74□□□□□ -1.49
CCDC66-219ENST00000484441 FAM234BA2RU67 622 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 C16orf96A6NNT2 1141 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 RRHO14718 337 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 PRC1O43663 620 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 MYL3P08590 195 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 PECAM1P16284 738 aaPredicted RBP5.73□□□□□ -1.49
CCDC66-219ENST00000484441 MATN1P21941 496 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 MMP13P45452 471 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 AK2P54819 239 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 HSF1Q00613 529 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 NSUN2Q08J23 767 aaKnown RBP eCLIP5.73□□□□□ -1.49
CCDC66-219ENST00000484441 TMEM196Q5HYL7 178 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 IZUMO3Q5VZ72 239 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 KSR2Q6VAB6 950 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 GLCCI1Q86VQ1 547 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 C16orf52Q8NHV5 167 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 WIPF2Q8TF74 440 aaPredicted RBP5.73□□□□□ -1.49
CCDC66-219ENST00000484441 CCDC136Q96JN2 1154 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 SPRTNQ9H040 489 aaPredicted RBP5.73□□□□□ -1.49
CCDC66-219ENST00000484441 NUAK2Q9H093 628 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 CA14Q9ULX7 337 aa5.73□□□□□ -1.49
CCDC66-219ENST00000484441 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.72□□□□□ -1.49
CCDC66-219ENST00000484441 GXYLT2A0PJZ3 443 aa5.72□□□□□ -1.49
CCDC66-219ENST00000484441 FGBP02675 491 aa5.72□□□□□ -1.49
CCDC66-219ENST00000484441 MYL1P05976 194 aa5.72□□□□□ -1.49
CCDC66-219ENST00000484441 EEF1GP26641 437 aaKnown RBP5.72□□□□□ -1.49
CCDC66-219ENST00000484441 HOXD9P28356 352 aaPredicted RBP5.72□□□□□ -1.49
CCDC66-219ENST00000484441 TACR3P29371 465 aa5.72□□□□□ -1.49
CCDC66-219ENST00000484441 LAMB3Q13751 1172 aa5.72□□□□□ -1.49
CCDC66-219ENST00000484441 CC2D1BQ5T0F9 858 aaKnown RBP5.72□□□□□ -1.49
CCDC66-219ENST00000484441 PIK3AP1Q6ZUJ8 805 aa5.72□□□□□ -1.49
CCDC66-219ENST00000484441 PIP4P1Q86T03 277 aa5.72□□□□□ -1.49
CCDC66-219ENST00000484441 TXLNBQ8N3L3 684 aa5.72□□□□□ -1.49
CCDC66-219ENST00000484441 PRSS3P2Q8NHM4 247 aa5.72□□□□□ -1.49
CCDC66-219ENST00000484441 FCRL4Q96PJ5 515 aa5.72□□□□□ -1.49
CCDC66-219ENST00000484441 AGO4Q9HCK5 861 aaKnown RBP5.72□□□□□ -1.49
CCDC66-219ENST00000484441 DTNAQ9Y4J8 743 aa5.72□□□□□ -1.49
CCDC66-219ENST00000484441 SIRT4Q9Y6E7 314 aaPredicted RBP5.72□□□□□ -1.49
CCDC66-219ENST00000484441 ZSCAN9O15535 394 aaPredicted RBP5.71□□□□□ -1.5
CCDC66-219ENST00000484441 TLR2O60603 784 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 VIPP01282 170 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 KRT18P05783 430 aaKnown RBP5.71□□□□□ -1.5
CCDC66-219ENST00000484441 DRD1P21728 446 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 IGHMBP2P38935 993 aaKnown RBP5.71□□□□□ -1.5
CCDC66-219ENST00000484441 YPEL5P62699 121 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 KPNB1Q14974 876 aaKnown RBP5.71□□□□□ -1.5
CCDC66-219ENST00000484441 PFKFB3Q16875 520 aaPredicted RBP5.71□□□□□ -1.5
CCDC66-219ENST00000484441 MPEG1Q2M385 716 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms