RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 ARHGAP8P85298 464 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 LMNB2Q03252 620 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 USP39Q53GS9 565 aaKnown RBP16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 C10orf76Q5T2E6 689 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 PMF1Q6P1K2 205 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 TMEM92Q6UXU6 159 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 KBTBD6Q86V97 674 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 RASSF3Q86WH2 238 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 IRF2BP1Q8IU81 584 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 FMNL3Q8IVF7 1028 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 FAM114A1Q8IWE2 563 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 ZNF513Q8N8E2 541 aaPredicted RBP16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 ZC3H10Q96K80 434 aaKnown RBP16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 PARD6AQ9NPB6 346 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 AGO1Q9UL18 857 aaKnown RBP16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 HBS1LQ9Y450 684 aaKnown RBP16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 SPAG17Q6Q759 2223 aa16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 MYO18AQ92614 2054 aaKnown RBP16.06■□□□□ 0.16
EXOSC3-205ENST00000482614 GTPBP10A4D1E9 387 aaKnown RBP16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 TRIM24O15164 1050 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 MED7O43513 233 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 FOXD2O60548 495 aaPredicted RBP16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 FBXO21O94952 628 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 CALCAP01258 141 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 CYBBP04839 570 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 SLC9A1P19634 815 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 ERCC5P28715 1186 aaPredicted RBP16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 DGKGP49619 791 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 PUM1Q14671 1186 aaKnown RBP eCLIP16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 TRIP4Q15650 581 aaPredicted RBP16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 CSRP2Q16527 193 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 EXOC3L4Q17RC7 722 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 ANO7Q6IWH7 933 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 TRIM65Q6PJ69 517 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 C11orf74Q86VG3 221 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 DENND1CQ8IV53 801 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 CPXM2Q8N436 756 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 EDEM1Q92611 657 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 GOLGA1Q92805 767 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 RMDN1Q96DB5 314 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 CRACR2AQ9BSW2 395 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 SEMA4GQ9NTN9 838 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 LMBRD1Q9NUN5 540 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 FBXO10Q9UK96 956 aa16.05■□□□□ 0.16
EXOSC3-205ENST00000482614 ADAM23O75077 832 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 GABBR2O75899 941 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 RHOBTB1O94844 696 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 EPN2O95208 641 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 PENKP01210 267 aaPredicted RBP16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 CISD3P0C7P0 127 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 HARS2P49590 506 aaKnown RBP16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 ELF2Q15723 593 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 MEA1Q16626 185 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 MAN2A1Q16706 1144 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 RSPO4Q2I0M5 234 aaPredicted RBP16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 PLK5Q496M5 336 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 CT47A1Q5JQC4 288 aaPredicted RBP16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 SMYD5Q6GMV2 418 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 SDE2Q6IQ49 451 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 BHMTQ93088 406 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 TPSD1Q9BZJ3 242 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 ZDHHC4Q9NPG8 344 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 PLK2Q9NYY3 685 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 APEX2Q9UBZ4 518 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 SFMBT1Q9UHJ3 866 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 ZNF292O60281 2723 aa16.04■□□□□ 0.16
EXOSC3-205ENST00000482614 PIK3R2O00459 728 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 LETM1O95202 739 aaPredicted RBP16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 LTFP02788 710 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 HNRNPLP14866 589 aaKnown RBP eCLIP16.03■□□□□ 0.161e-7■■□□□ 14
EXOSC3-205ENST00000482614 GNA15P30679 374 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 NTSR1P30989 418 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 GPD2P43304 727 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 ACADSBP45954 432 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 RPL34P49207 117 aaKnown RBP16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 ARHGAP44Q17R89 818 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 DPCR1Q3MIW9 517 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 FYB2Q5VWT5 728 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 MSANTD2Q6P1R3 559 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 GJB7Q6PEY0 223 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 TOGARAM2Q6ZUX3 1019 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 ERMP1Q7Z2K6 904 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 FAM217AQ8IXS0 508 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 MDGA1Q8NFP4 955 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 ZNF606Q8WXB4 792 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 GBP4Q96PP9 640 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 DUSP15Q9H1R2 295 aaPredicted RBP16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 ARRDC1-AS1Q9H2J1 176 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 DLL3Q9NYJ7 618 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 SLC27A6Q9Y2P4 619 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 PCDHGA5Q9Y5G8 931 aa16.03■□□□□ 0.16
EXOSC3-205ENST00000482614 PRRT4C9JH25 899 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 DCLK1O15075 740 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 SART1O43290 800 aaKnown RBP16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 THAP12O43422 761 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 LATS1O95835 1130 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 PRKCSHP14314 528 aaPredicted RBP16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 PON1P27169 355 aa16.02■□□□□ 0.16
EXOSC3-205ENST00000482614 GBP1P32455 592 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms