RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 ASB16Q96NS5 453 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 SLC22A12Q96S37 553 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 CYP2S1Q96SQ9 504 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 NCAPGQ9BPX3 1015 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 KLF16Q9BXK1 252 aaPredicted RBP21.62■■□□□ 1.05
VPS16-207ENST00000481812 NACA2Q9H009 215 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 KIF9Q9HAQ2 790 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 OBP2AQ9NY56 170 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 EPS15L1Q9UBC2 864 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 NUDT5Q9UKK9 219 aa21.62■■□□□ 1.05
VPS16-207ENST00000481812 SPTBN5Q9NRC6 3674 aaKnown RBP21.62■■□□□ 1.05
VPS16-207ENST00000481812 PRUNE2Q8WUY3 3088 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 MBL2P11226 248 aaPredicted RBP21.61■■□□□ 1.05
VPS16-207ENST00000481812 GBP2P32456 591 aaPredicted RBP21.61■■□□□ 1.05
VPS16-207ENST00000481812 ARHGAP25P42331 645 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 RING1Q06587 406 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 DDX42Q86XP3 938 aaKnown RBP eCLIP21.61■■□□□ 1.05
VPS16-207ENST00000481812 ARID3BQ8IVW6 561 aaPredicted RBP21.61■■□□□ 1.05
VPS16-207ENST00000481812 ZSCAN18Q8TBC5 510 aaPredicted RBP21.61■■□□□ 1.05
VPS16-207ENST00000481812 SMARCD2Q92925 531 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 E2F7Q96AV8 911 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 ZFRQ96KR1 1074 aaKnown RBP21.61■■□□□ 1.05
VPS16-207ENST00000481812 CFAP57Q96MR6 1250 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 TSGA10Q9BZW7 698 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 LACRTQ9GZZ8 138 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 PRDM6Q9NQX0 595 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 TDP1Q9NUW8 608 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 IP6K2Q9UHH9 426 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 TLR6Q9Y2C9 796 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 NR2E1Q9Y466 385 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 XIRP2A4UGR9 3374 aa21.61■■□□□ 1.05
VPS16-207ENST00000481812 MYO1FO00160 1098 aa21.6■■□□□ 1.05
VPS16-207ENST00000481812 IRAK2O43187 625 aa21.6■■□□□ 1.05
VPS16-207ENST00000481812 SULT1E1P49888 294 aa21.6■■□□□ 1.05
VPS16-207ENST00000481812 PIGHQ14442 188 aaPredicted RBP21.6■■□□□ 1.05
VPS16-207ENST00000481812 TRIP4Q15650 581 aaPredicted RBP21.6■■□□□ 1.05
VPS16-207ENST00000481812 TAC4Q86UU9 113 aa21.6■■□□□ 1.05
VPS16-207ENST00000481812 PLCD3Q8N3E9 789 aa21.6■■□□□ 1.05
VPS16-207ENST00000481812 NIPA2Q8N8Q9 360 aa21.6■■□□□ 1.05
VPS16-207ENST00000481812 SFMBT1Q9UHJ3 866 aa21.6■■□□□ 1.05
VPS16-207ENST00000481812 RASAL2Q9UJF2 1139 aa21.6■■□□□ 1.05
VPS16-207ENST00000481812 ANAPC7Q9UJX3 599 aa21.6■■□□□ 1.05
VPS16-207ENST00000481812 PPP2R2CQ9Y2T4 447 aa21.6■■□□□ 1.05
VPS16-207ENST00000481812 M0QYT0 321 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 MDM4O15151 490 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 KRT86O43790 486 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 IGLV3-27P01718 113 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 PITX1P78337 314 aaPredicted RBP21.59■■□□□ 1.05
VPS16-207ENST00000481812 OGDHQ02218 1023 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 TFF2Q03403 129 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 MTA1Q13330 715 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 FAM78AQ5JUQ0 283 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 OTUD1Q5VV17 481 aaPredicted RBP21.59■■□□□ 1.05
VPS16-207ENST00000481812 ZDHHC14Q8IZN3 488 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 CELF5Q8N6W0 485 aaKnown RBP21.59■■□□□ 1.05
VPS16-207ENST00000481812 ATXN2LQ8WWM7 1075 aaKnown RBP21.59■■□□□ 1.05
VPS16-207ENST00000481812 USP13Q92995 863 aaPredicted RBP21.59■■□□□ 1.05
VPS16-207ENST00000481812 PLD4Q96BZ4 506 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 SLC39A13Q96H72 371 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 TBCBQ99426 244 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 TRIM7Q9C029 511 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 OSGEPQ9NPF4 335 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 DDIT4Q9NX09 232 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 PAXBP1Q9Y5B6 917 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 CPQQ9Y646 472 aa21.59■■□□□ 1.05
VPS16-207ENST00000481812 SLC12A8A0AV02 714 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 CCP110O43303 1012 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 ZSCAN12O43309 604 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 SLC2A3P11169 496 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 PSMA2P25787 234 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 ZNF252P-AS1Q0IIN9 211 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 IFI16Q16666 785 aaKnown RBP21.58■■□□□ 1.05
VPS16-207ENST00000481812 MTSS1LQ765P7 747 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 MIB1Q86YT6 1006 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 UNC45BQ8IWX7 931 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 RNF10Q8N5U6 811 aaKnown RBP21.58■■□□□ 1.05
VPS16-207ENST00000481812 TDRD5Q8NAT2 981 aaKnown RBP21.58■■□□□ 1.05
VPS16-207ENST00000481812 DCLK3Q9C098 648 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 FAM204AQ9H8W3 233 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.58■■□□□ 1.05
VPS16-207ENST00000481812 PRKAG3Q9UGI9 489 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 TFR2Q9UP52 801 aa21.58■■□□□ 1.05
VPS16-207ENST00000481812 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.58■■□□□ 1.05
VPS16-207ENST00000481812 C5orf42Q9H799 3197 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 RNF8O76064 485 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 PROSCO94903 275 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 TFE3P19532 575 aaPredicted RBP21.57■■□□□ 1.04
VPS16-207ENST00000481812 MAN1A1P33908 653 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 RDXP35241 583 aaKnown RBP21.57■■□□□ 1.04
VPS16-207ENST00000481812 NOP2P46087 812 aaKnown RBP21.57■■□□□ 1.04
VPS16-207ENST00000481812 CXCR3P49682 368 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 TBX4P57082 545 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 ZXDBP98169 803 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 DEUP1Q05D60 604 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 USP4Q13107 963 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 PPP2R5DQ14738 602 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 C15orf59Q2T9L4 293 aaPredicted RBP21.57■■□□□ 1.04
VPS16-207ENST00000481812 BRMS1LQ5PSV4 323 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 NUGGCQ68CJ6 796 aa21.57■■□□□ 1.04
VPS16-207ENST00000481812 SND1Q7KZF4 910 aaKnown RBP eCLIP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms