RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ZZEF1O43149 2961 aa11.09□□□□□ -0.63
SSBP1-210ENST00000481508 SPEGQ15772 3267 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 CNOT1A5YKK6 2376 aaKnown RBP11.08□□□□□ -0.64
SSBP1-210ENST00000481508 LRRC53A6NM62 1247 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 MSI1O43347 362 aaKnown RBP11.08□□□□□ -0.64
SSBP1-210ENST00000481508 PI15O43692 258 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 HMBSP08397 361 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 KRT9P35527 623 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 ATP5C1P36542 298 aaKnown RBP11.08□□□□□ -0.64
SSBP1-210ENST00000481508 PDE6CP51160 858 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 TPM4P67936 248 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 NOMO3P69849 1222 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 PITX1P78337 314 aaPredicted RBP11.08□□□□□ -0.64
SSBP1-210ENST00000481508 ARID5AQ03989 594 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 EFEMP1Q12805 493 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 GAB4Q2WGN9 574 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 EML3Q32P44 896 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 ARHGAP29Q52LW3 1261 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 C10orf120Q5SQS8 335 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 TXNDC11Q6PKC3 985 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 TPRG1Q6ZUI0 275 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 FAM183BPQ6ZVS7 135 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 MIB1Q86YT6 1006 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 STK32AQ8WU08 396 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 DNASE1L2Q92874 299 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 LHX5Q9H2C1 402 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 TBC1D17Q9HA65 648 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 DUS2Q9NX74 493 aaKnown RBP11.08□□□□□ -0.64
SSBP1-210ENST00000481508 CLIC5Q9NZA1 410 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 SFMBT1Q9UHJ3 866 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 RASAL2Q9UJF2 1139 aa11.08□□□□□ -0.64
SSBP1-210ENST00000481508 GCN1Q92616 2671 aaKnown RBP11.07□□□□□ -0.64
SSBP1-210ENST00000481508 STC2O76061 302 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 LTFP02788 710 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 KLKB1P03952 638 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 CYP1A1P04798 512 aaPredicted RBP11.07□□□□□ -0.64
SSBP1-210ENST00000481508 RALAP11233 206 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 BPIFB4P59827 614 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 CDR2Q01850 454 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 SYPL2Q5VXT5 272 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 NAA35Q5VZE5 725 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 BTBD8Q5XKL5 378 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 SMYD5Q6GMV2 418 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 KLHDC10Q6PID8 442 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 OLFML1Q6UWY5 402 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 CACNA2D4Q7Z3S7 1137 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 IRF2BP2Q7Z5L9 587 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 DNAAF5Q86Y56 855 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 BBS7Q8IWZ6 715 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 PLPP6Q8IY26 295 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 FLCNQ8NFG4 579 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 OSCP1Q8WVF1 389 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 CPA5Q8WXQ8 436 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 IRGQQ8WZA9 623 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 IRF7Q92985 503 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 PPP1R13BQ96KQ4 1090 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 SYT11Q9BT88 431 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 DDX23Q9BUQ8 820 aaKnown RBP11.07□□□□□ -0.64
SSBP1-210ENST00000481508 NACA2Q9H009 215 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 TRPV5Q9NQA5 729 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 DNMT3LQ9UJW3 386 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 NAALADL1Q9UQQ1 740 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 DAAM1Q9Y4D1 1078 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 PIAS3Q9Y6X2 628 aa11.07□□□□□ -0.64
SSBP1-210ENST00000481508 SLC12A8A0AV02 714 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 ANTXRLA6NF34 631 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 GRAP2O75791 330 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 FBXO21O94952 628 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 GYPCP04921 128 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 CYP17A1P05093 508 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 GLULP15104 373 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 TARSP26639 723 aaKnown RBP11.06□□□□□ -0.64
SSBP1-210ENST00000481508 CTHP32929 405 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 ACADSBP45954 432 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 IFNAR2P48551 515 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 STARD6P59095 220 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 PFKPQ01813 784 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 GOLGA8FQ08AF8 430 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 GOLGA8DPQ0D2H9 430 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 PTP4A2Q12974 167 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 FZD5Q13467 585 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 RUNX3Q13761 415 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 PUM1Q14671 1186 aaKnown RBP eCLIP11.06□□□□□ -0.64
SSBP1-210ENST00000481508 TRNP1Q6NT89 227 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 MSANTD2Q6P1R3 559 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 Q6ZNB5 142 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 RSRC2Q7L4I2 434 aaKnown RBP11.06□□□□□ -0.64
SSBP1-210ENST00000481508 PHLDB2Q86SQ0 1253 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 FMNL3Q8IVF7 1028 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 ARHGAP18Q8N392 663 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 ZNF276Q8N554 614 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 DCLK2Q8N568 766 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 SLC30A5Q8TAD4 765 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 ADAM32Q8TC27 787 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 AGPAT1Q99943 283 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 ADAM33Q9BZ11 813 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 ECT2Q9H8V3 914 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 THG1LQ9NWX6 298 aaKnown RBP11.06□□□□□ -0.64
SSBP1-210ENST00000481508 MARCH2Q9P0N8 246 aa11.06□□□□□ -0.64
SSBP1-210ENST00000481508 E2F8A0AVK6 867 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms