RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 SH2D4AQ9H788 454 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 MRPL44Q9H9J2 332 aaKnown RBP8.54□□□□□ -1.04
LSM5-210ENST00000480956 ASH2LQ9UBL3 628 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 SLCO3A1Q9UIG8 710 aa8.54□□□□□ -1.04
LSM5-210ENST00000480956 DNM1LO00429 736 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 HGSO14964 777 aaPredicted RBP8.53□□□□□ -1.04
LSM5-210ENST00000480956 BCAT2O15382 392 aaPredicted RBP8.53□□□□□ -1.04
LSM5-210ENST00000480956 SEPT4O43236 478 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 PPP1R11O60927 126 aaPredicted RBP8.53□□□□□ -1.04
LSM5-210ENST00000480956 GNAI3P08754 354 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 SUPT20HL2P0C7V6 817 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 TOP1P11387 765 aaKnown RBP8.53□□□□□ -1.04
LSM5-210ENST00000480956 SRFP11831 508 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 SP100P23497 879 aaPredicted RBP8.53□□□□□ -1.04
LSM5-210ENST00000480956 PRKCHP24723 683 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 CD151P48509 253 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 CDH8P55286 799 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 GNAI1P63096 354 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 RALGDSQ12967 914 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 ITGA7Q13683 1181 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 SUPT20HL1Q3ZLR7 823 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 MIB1Q86YT6 1006 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 TRIM48Q8IWZ4 208 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 PQLC1Q8N2U9 271 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 HMGB4Q8WW32 186 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 CLEC4DQ8WXI8 215 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 SAAL1Q96ER3 474 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 NAA11Q9BSU3 229 aaPredicted RBP8.53□□□□□ -1.04
LSM5-210ENST00000480956 TUBB6Q9BUF5 446 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 MS4A7Q9GZW8 240 aaPredicted RBP8.53□□□□□ -1.04
LSM5-210ENST00000480956 TTYH1Q9H313 450 aaPredicted RBP8.53□□□□□ -1.04
LSM5-210ENST00000480956 RPAP3Q9H6T3 665 aaPredicted RBP8.53□□□□□ -1.04
LSM5-210ENST00000480956 UNKLQ9H9P5 680 aaKnown RBP8.53□□□□□ -1.04
LSM5-210ENST00000480956 AIPL1Q9NZN9 384 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 KCND2Q9NZV8 630 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 RWDD3Q9Y3V2 267 aa8.53□□□□□ -1.04
LSM5-210ENST00000480956 NFIBO00712 420 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 PEX11AO75192 247 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 GPR32O75388 356 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 UNC5CO95185 931 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 C22orf31O95567 290 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 IFNB1P01574 187 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 PDHBP11177 359 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 GZMAP12544 262 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 SLC5A2P31639 672 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 ARL1P40616 181 aaPredicted RBP8.52□□□□□ -1.05
LSM5-210ENST00000480956 UCP3P55916 312 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 MXRA7P84157 204 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 MST1LQ2TV78 715 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 HLA-DQA1Q5Y7H0 255 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 TTI2Q6NXR4 508 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 ZDHHC24Q6UX98 284 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 FAM217AQ8IXS0 508 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 SYCP3Q8IZU3 236 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 ANKRD49Q8WVL7 239 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 TXN2Q99757 166 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 TTPALQ9BTX7 342 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 ABCG8Q9H221 673 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 MROH8Q9H579 483 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 DNAJC18Q9H819 358 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 PLEKHA2Q9HB19 425 aa8.52□□□□□ -1.05
LSM5-210ENST00000480956 SEMA4BQ9NPR2 832 aaPredicted RBP8.52□□□□□ -1.05
LSM5-210ENST00000480956 BEX4Q9NWD9 120 aaPredicted RBP8.52□□□□□ -1.05
LSM5-210ENST00000480956 GPR75-ASB3A0A0A6YYF3 556 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 PNMA6EA0A0J9YXQ4 647 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 LOC102723971A0A1B0GUV8 181 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 FRMD3A2A2Y4 597 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 CTAGE9A4FU28 777 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 SGK1O00141 431 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 CTDSP2O14595 271 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 PRPF4O43172 522 aaKnown RBP eCLIP8.51□□□□□ -1.05
LSM5-210ENST00000480956 SEC14L2O76054 403 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 WISP1O95388 367 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 WEE2P0C1S8 567 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 CDH2P19022 906 aaPredicted RBP8.51□□□□□ -1.05
LSM5-210ENST00000480956 KELP23276 732 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 MSX2P35548 267 aaPredicted RBP8.51□□□□□ -1.05
LSM5-210ENST00000480956 IL15P40933 162 aaPredicted RBP8.51□□□□□ -1.05
LSM5-210ENST00000480956 PRAMEP78395 509 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 ARF5P84085 180 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 MAP2K1Q02750 393 aaPredicted RBP8.51□□□□□ -1.05
LSM5-210ENST00000480956 ARHGEF7Q14155 803 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 PCLAFQ15004 111 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 MEP1BQ16820 701 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 SYNE3Q6ZMZ3 975 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 LINC00696Q6ZRV3 163 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 SIX6OS1Q8N1H7 587 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 SVOPQ8N4V2 548 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 FAM71DQ8N9W8 422 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 RAPGEF4Q8WZA2 1011 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 CPEB1Q9BZB8 566 aaKnown RBP8.51□□□□□ -1.05
LSM5-210ENST00000480956 FETUBQ9UGM5 382 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 ACSL6Q9UKU0 697 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 CFAP45Q9UL16 551 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 BTBD3Q9Y2F9 522 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 TBC1D30Q9Y2I9 924 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 ATP8B3O60423 1300 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 KIF1CO43896 1103 aaKnown RBP8.51□□□□□ -1.05
LSM5-210ENST00000480956 PRAMEF4O60810 478 aa8.51□□□□□ -1.05
LSM5-210ENST00000480956 RTN2O75298 545 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms