RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 RIN3Q8TB24 985 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 ITFG1Q8TB96 612 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 ADAMTS19Q8TE59 1207 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 ALG3Q92685 438 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 KRT35Q92764 455 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 PPP2R3CQ969Q6 453 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 MSLNLQ96KJ4 702 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 ZFRQ96KR1 1074 aaKnown RBP9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 GAS2L1Q99501 681 aaPredicted RBP9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 MAGEB5Q9BZ81 275 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 S1PR5Q9H228 398 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 FAM204AQ9H8W3 233 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 WDR6Q9NNW5 1121 aaKnown RBP9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 KLHL11Q9NVR0 708 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 GPATCH2LQ9NWQ4 482 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 DDIT4Q9NX09 232 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 CLDND1Q9NY35 253 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 TRPM5Q9NZQ8 1165 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 COX16Q9P0S2 106 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 UXTQ9UBK9 157 aaPredicted RBP9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 IP6K2Q9UHH9 426 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 RASAL2Q9UJF2 1139 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 ALG6Q9Y672 507 aa9.35□□□□□ -0.91
NUDCD3-208ENST00000480209 C5orf42Q9H799 3197 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 M0QYT0 321 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 MYO1FO00160 1098 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 ENC1O14682 589 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 CAPN9O14815 690 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 KIF5CO60282 957 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 ZNF500O60304 480 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 PRAMEF12O95522 483 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 IGLV3-27P01718 113 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 ATP1A1P05023 1023 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 PTPN2P17706 415 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 MSNP26038 577 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 MIPP30301 263 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 CDC25CP30307 473 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 RDXP35241 583 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 GJC1P36383 396 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 PSEN1P49768 467 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 TUBP50607 506 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 GNG11P61952 73 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 EFEMP1Q12805 493 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 PIGHQ14442 188 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 CLUL1Q15846 466 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 TAF12Q16514 161 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 ATP13A4Q4VNC1 1196 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 C10orf120Q5SQS8 335 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 HECTD3Q5T447 861 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 ARTNQ5T4W7 220 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 MEI1Q5TIA1 1274 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 DCAF12L1Q5VU92 463 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 SYT10Q6XYQ8 523 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 PDZD4Q76G19 769 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 RSRC2Q7L4I2 434 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 STRADAQ7RTN6 431 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 ARL14EPQ8N8R7 260 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 TRIM58Q8NG06 486 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 GOLGA1Q92805 767 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 PABPC5Q96DU9 382 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 PGAP3Q96FM1 320 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 FCRL2Q96LA5 508 aaPredicted RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 ZSWIM3Q96MP5 696 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 CYP2S1Q96SQ9 504 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 TLR10Q9BXR5 811 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 SMG9Q9H0W8 520 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 ATXN3LQ9H3M9 355 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 TRPC7Q9HCX4 862 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 MTMR10Q9NXD2 777 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 EHD2Q9NZN4 543 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 PCSK1NQ9UHG2 260 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 XPO7Q9UIA9 1087 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 STAP1Q9ULZ2 295 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 MIA3Q5JRA6 1907 aa9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 NYNRINQ9P2P1 1898 aaKnown RBP9.34□□□□□ -0.91
NUDCD3-208ENST00000480209 COL4A2P08572 1712 aa9.34□□□□□ -0.92
NUDCD3-208ENST00000480209 CHD5Q8TDI0 1954 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 CLUHO75153 1309 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 XIRP2A4UGR9 3374 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 SPOPO43791 374 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 RALAP11233 206 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 TNNT1P13805 278 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 CTNNA2P26232 953 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 CTNNA1P35221 906 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 GGCXP38435 758 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 DNA2P51530 1060 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 KCNQ1P51787 676 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 ETF1P62495 437 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 DEUP1Q05D60 604 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 CCDC85BQ15834 202 aaPredicted RBP9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 IFI16Q16666 785 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 CA9Q16790 459 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 SMTNL2Q2TAL5 461 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 ZC3H12AQ5D1E8 599 aaKnown RBP9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 GPR158Q5T848 1215 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 GPR153Q6NV75 609 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 CC2D1AQ6P1N0 951 aaPredicted RBP9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 ELMSAN1Q6PJG2 1045 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 PEX26Q7Z412 305 aa9.33□□□□□ -0.92
NUDCD3-208ENST00000480209 ANKS1BQ7Z6G8 1248 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms