RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 TRIP4Q15650 581 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 TSR1Q2NL82 804 aaKnown RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 TMEM31Q5JXX7 168 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 IER5LQ5T953 404 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 FAM102AQ5T9C2 384 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 SYPL2Q5VXT5 272 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 HGSNATQ68CP4 663 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 ZNF852Q6ZMS4 543 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 Q6ZNB5 142 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 MMS22LQ6ZRQ5 1243 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 TPRG1Q6ZUI0 275 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 ARCQ7LC44 396 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 ZNF571Q7Z3V5 609 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 VPS36Q86VN1 386 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 RALGPS2Q86X27 583 aaPredicted RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 DRC7Q8IY82 874 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 DEFB106AQ8N104 65 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 OR8K1Q8NGG5 319 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 SLC30A5Q8TAD4 765 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 DQX1Q8TE96 717 aaKnown RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 WBP2Q969T9 261 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 PBXIP1Q96AQ6 731 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 MRFAP1L1Q96HT8 127 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 C11orf70Q9BRQ4 267 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 DDX23Q9BUQ8 820 aaKnown RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 C11orf16Q9NQ32 467 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 RRN3Q9NYV6 651 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 ADAM22Q9P0K1 906 aa11.3□□□□□ -0.6
ATG4B-219ENST00000479941 MRPS17Q9Y2R5 130 aaKnown RBP11.3□□□□□ -0.6
ATG4B-219ENST00000479941 KANSL1LA0AUZ9 987 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 SPECC1L-ADORA2AF8WAN1 911 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 DAB1O75553 588 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 GRAP2O75791 330 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 LATS1O95835 1130 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 TRUB2O95900 331 aaKnown RBP11.29□□□□□ -0.6
ATG4B-219ENST00000479941 HMBSP08397 361 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 ARSAP15289 507 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 CORO1AP31146 461 aaKnown RBP11.29□□□□□ -0.6
ATG4B-219ENST00000479941 GBP1P32455 592 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 NOS2P35228 1153 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 CHKAP35790 457 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 MATKP42679 507 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 ZNF75DP51815 510 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 TBX4P57082 545 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 RING1Q06587 406 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 PTP4A2Q12974 167 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 C2CD6Q53TS8 623 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 TDRD12Q587J7 1177 aaKnown RBP11.29□□□□□ -0.6
ATG4B-219ENST00000479941 DCAF6Q58WW2 860 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 NUGGCQ68CJ6 796 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 ACAD10Q6JQN1 1059 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 TMC6Q7Z403 805 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 CNGA4Q8IV77 575 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 UNC45BQ8IWX7 931 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 BBS7Q8IWZ6 715 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 OLIG1Q8TAK6 271 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 TTC8Q8TAM2 541 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 EXOC4Q96A65 974 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 VCPIP1Q96JH7 1222 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 NELL2Q99435 816 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 DNAJC7Q99615 494 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 TBC1D17Q9HA65 648 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 TMEM51Q9NW97 253 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 ZNHIT6Q9NWK9 470 aaKnown RBP11.29□□□□□ -0.6
ATG4B-219ENST00000479941 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.29□□□□□ -0.6
ATG4B-219ENST00000479941 STAP1Q9ULZ2 295 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 TLR6Q9Y2C9 796 aa11.29□□□□□ -0.6
ATG4B-219ENST00000479941 FAM170AA1A519 330 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 FAM86C2PA6NEL3 165 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 OTOL1A6NHN0 477 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-219ENST00000479941 GOLGA8SH3BPF8 625 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 STK25O00506 426 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 DDX3XO00571 662 aaKnown RBP eCLIP11.28□□□□□ -0.6
ATG4B-219ENST00000479941 SCAMP3O14828 347 aaKnown RBP11.28□□□□□ -0.6
ATG4B-219ENST00000479941 IRAK2O43187 625 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 MSI1O43347 362 aaKnown RBP11.28□□□□□ -0.6
ATG4B-219ENST00000479941 MFAP3LO75121 409 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 ADH1CP00326 375 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 PDGFBP01127 241 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-219ENST00000479941 IGLV3-25P01717 112 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 IGLV3-27P01718 113 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 KLKB1P03952 638 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 CYP17A1P05093 508 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 CTHP32929 405 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 GJA4P35212 333 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 CLCN5P51795 746 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 RNASE9P60153 205 aaKnown RBP11.28□□□□□ -0.6
ATG4B-219ENST00000479941 GAD2Q05329 585 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 TBX2Q13207 712 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-219ENST00000479941 DHCR24Q15392 516 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 RHBDF2Q6PJF5 856 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 MON1BQ7L1V2 547 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 TAC4Q86UU9 113 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 DENND1CQ8IV53 801 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 SUGP1Q8IWZ8 645 aaKnown RBP11.28□□□□□ -0.6
ATG4B-219ENST00000479941 FBXL6Q8N531 539 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 C3orf20Q8ND61 904 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 FLCNQ8NFG4 579 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 ADAM32Q8TC27 787 aa11.28□□□□□ -0.6
ATG4B-219ENST00000479941 FAM3CQ92520 227 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms