RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 PEPDP12955 493 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 MLH1P40692 756 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 PAFAH1B1P43034 410 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 GP2P55259 537 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 MTAPQ13126 283 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 SSPNQ14714 243 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 SEC23BQ15437 767 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 ATF7IPQ6VMQ6 1270 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 FSTL5Q8N475 847 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 TMEM176AQ96HP8 235 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 LCORQ96JN0 433 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 ZMAT2Q96NC0 199 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 PAAF1Q9BRP4 392 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 RSPH9Q9H1X1 276 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 ZCCHC17Q9NP64 241 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 IRAK3Q9Y616 596 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 EFCAB5A4FU69 1503 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 CPS1P31327 1500 aa8.12□□□□□ -1.11
GAPVD1-217ENST00000479511 IQGAP2Q13576 1575 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 M0QZQ0 153 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 BIN1O00499 593 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 CTIFO43310 598 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 B4GALT4O60513 344 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 CLEC3BP05452 202 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 GNAT2P19087 354 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 ITGALP20701 1170 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 EPHA8P29322 1005 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 PRKAR1BP31321 381 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 HARS2P49590 506 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 RAC3P60763 192 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 E2F2Q14209 437 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 BECN1Q14457 450 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 ACOX1Q15067 660 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 LY6KQ17RY6 165 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 CBWD5Q5RIA9 395 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 LIPMQ5VYY2 423 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 RINLQ6ZS11 566 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 CARFQ8N187 725 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 FSIP1Q8NA03 581 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 Q8NA96 180 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 LSM14AQ8ND56 463 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 ST8SIA2Q92186 375 aa8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 STN1Q9H668 368 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 EIF2B3Q9NR50 452 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 TLR8Q9NR97 1041 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 SEPT11Q9NVA2 429 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 CNOT7Q9UIV1 285 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 SMG5Q9UPR3 1016 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 SETD1AO15047 1707 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-217ENST00000479511 hCG_1807616A0A1W2PRN6 198 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 AGAP5A6NIR3 686 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 TNPO2O14787 897 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 FFAR3O14843 346 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 ADRB2P07550 413 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 KCNA2P16389 499 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 THBS4P35443 961 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 RNASE9P60153 205 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 SP2Q02086 613 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 RILPL1Q5EBL4 403 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 ZNF569Q5MCW4 686 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 FAM102AQ5T9C2 384 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 SLC22A25Q6T423 547 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 TTC30BQ8N4P2 665 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 ANKRD44Q8N8A2 993 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 CUL5Q93034 780 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 TTC14Q96N46 770 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 SLF1Q9BQI6 1058 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 ZSWIM1Q9BR11 485 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 PDCL3Q9H2J4 239 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 TAOK3Q9H2K8 898 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 TTYH1Q9H313 450 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 SERTAD3Q9UJW9 196 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 BAG5Q9UL15 447 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 OAZ3Q9UMX2 235 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 PCDHGB4Q9UN71 923 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 CLCA2Q9UQC9 943 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 PCDHA10Q9Y5I2 948 aa8.1□□□□□ -1.11
GAPVD1-217ENST00000479511 MAGI2Q86UL8 1455 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 RAPGEF2Q9Y4G8 1499 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 LEFTY2O00292 366 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 CDC14BO60729 498 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 ERBB2P04626 1255 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 HSPA1AP0DMV8 641 aaKnown RBP8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 HSPA1BP0DMV9 641 aaKnown RBP8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 UBL4AP11441 157 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 VDRP11473 427 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 LAMP2P13473 410 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 ALADP13716 330 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 PI3P19957 117 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 DRD1P21728 446 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 MGAT1P26572 445 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 CD6P30203 668 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 NDUFV1P49821 464 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 ROR1Q01973 937 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 RNASELQ05823 741 aaKnown RBP8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 MPP3Q13368 585 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 TBRG1Q3YBR2 411 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 DEPDC1Q5TB30 811 aa8.09□□□□□ -1.11
GAPVD1-217ENST00000479511 NAA35Q5VZE5 725 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms