RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 TAGLNQ01995 201 aaKnown RBP7.02□□□□□ -1.29
USP48-208ENST00000479177 YWHAHQ04917 246 aaPredicted RBP7.02□□□□□ -1.29
USP48-208ENST00000479177 KIF5AQ12840 1032 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 PTP4A2Q12974 167 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 MRPL58Q14197 206 aaKnown RBP7.02□□□□□ -1.29
USP48-208ENST00000479177 ARHGAP29Q52LW3 1261 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 MDH1BQ5I0G3 518 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 ACAD10Q6JQN1 1059 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 PPP1R2P3Q6NXS1 205 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 KCNT2Q6UVM3 1135 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 TTC30AQ86WT1 665 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 PHF13Q86YI8 300 aaPredicted RBP7.02□□□□□ -1.29
USP48-208ENST00000479177 WDTC1Q8N5D0 677 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 C12orf29Q8N999 325 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 OR10T2Q8NGX3 314 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 PHOSPHO2Q8TCD6 241 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 CPA5Q8WXQ8 436 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 MYLPFQ96A32 169 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 ZNF653Q96CK0 615 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 ARHGEF26Q96DR7 871 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 IGSF21Q96ID5 467 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 ACBD6Q9BR61 282 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 HERC2P3Q9BVR0 1158 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 ZNF518BQ9C0D4 1074 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 THAP2Q9H0W7 228 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 PDCL3Q9H2J4 239 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 MTIF3Q9H2K0 278 aaKnown RBP7.02□□□□□ -1.29
USP48-208ENST00000479177 LZTFL1Q9NQ48 299 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 CYTH4Q9UIA0 394 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 GTF3C4Q9UKN8 822 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 TSPAN16Q9UKR8 245 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 CEP83Q9Y592 693 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 NR2E3Q9Y5X4 410 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 SLC4A7Q9Y6M7 1214 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 MYO7AQ13402 2215 aa7.02□□□□□ -1.29
USP48-208ENST00000479177 PLXNA4Q9HCM2 1894 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 A0A0A6YYK5 440 aaPredicted RBP7.01□□□□□ -1.29
USP48-208ENST00000479177 MYBPHLA2RUH7 354 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 LCHNA4D1U4 455 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 ANKRD62A6NC57 917 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 OR6C75A6NL08 312 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 KRT86O43790 486 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 TBC1D4O60343 1298 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 FBXO24O75426 580 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 CYP1A2P05177 515 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 MYBL1P10243 752 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 DRD2P14416 443 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 ABCB4P21439 1286 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 MMP8P22894 467 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 ADORA2BP29275 332 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 PPM1AP35813 382 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 GPD2P43304 727 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 ALDH7A1P49419 539 aaKnown RBP7.01□□□□□ -1.29
USP48-208ENST00000479177 BCAT1P54687 386 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 TSPY1Q01534 308 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 BST2Q10589 180 aaKnown RBP7.01□□□□□ -1.29
USP48-208ENST00000479177 PDCLQ13371 301 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 TCEAL1Q15170 157 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 PTPN20Q4JDL3 420 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 RTP2Q5QGT7 225 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 C9orf50Q5SZB4 431 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 SPOUT1Q5T280 376 aaKnown RBP7.01□□□□□ -1.29
USP48-208ENST00000479177 FAM171A1Q5VUB5 890 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 ALG1LQ6GMV1 187 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 ZNF280DQ6N043 979 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 FAM171BQ6P995 826 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 MMS22LQ6ZRQ5 1243 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 PAQR9Q6ZVX9 377 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 TAS1R1Q7RTX1 841 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 MCOLN2Q8IZK6 566 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 FUKQ8N0W3 1084 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 THEM5Q8N1Q8 247 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 FIBCD1Q8N539 461 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 MYCBPAPQ8TBZ2 947 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 SLC2A14Q8TDB8 520 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 STK35Q8TDR2 534 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 FBF1Q8TES7 1133 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 CTNNBL1Q8WYA6 563 aaPredicted RBP7.01□□□□□ -1.29
USP48-208ENST00000479177 RFFLQ8WZ73 363 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 SECISBP2LQ93073 1101 aaKnown RBP7.01□□□□□ -1.29
USP48-208ENST00000479177 FAM46AQ96IP4 442 aaKnown RBP7.01□□□□□ -1.29
USP48-208ENST00000479177 B3GALT6Q96L58 329 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 C16orf45Q96MC5 204 aaPredicted RBP7.01□□□□□ -1.29
USP48-208ENST00000479177 TMEM209Q96SK2 561 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 CPXM1Q96SM3 734 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 RAD9AQ99638 391 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 HNRNPABQ99729 332 aaKnown RBP7.01□□□□□ -1.29
USP48-208ENST00000479177 C11orf70Q9BRQ4 267 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 TTPALQ9BTX7 342 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 TMPRSS13Q9BYE2 586 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 B3GNT5Q9BYG0 378 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 ZCWPW1Q9H0M4 648 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 KRT82Q9NSB4 513 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 TMLHEQ9NVH6 421 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 SPG21Q9NZD8 308 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 HESX1Q9UBX0 185 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 TJP2Q9UDY2 1190 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 INSL6Q9Y581 213 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 DUSP10Q9Y6W6 482 aa7.01□□□□□ -1.29
USP48-208ENST00000479177 TCRBV5S1A1TA0A578 114 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms