RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 GRSF1Q12849 480 aaKnown RBP eCLIP21.38■■□□□ 1.01
VARS-224ENST00000479051 TRIP4Q15650 581 aaPredicted RBP21.38■■□□□ 1.01
VARS-224ENST00000479051 TXNDC11Q6PKC3 985 aa21.38■■□□□ 1.01
VARS-224ENST00000479051 CPA5Q8WXQ8 436 aa21.38■■□□□ 1.01
VARS-224ENST00000479051 WBP2Q969T9 261 aa21.38■■□□□ 1.01
VARS-224ENST00000479051 XPO4Q9C0E2 1151 aaKnown RBP21.38■■□□□ 1.01
VARS-224ENST00000479051 NAALADL1Q9UQQ1 740 aa21.38■■□□□ 1.01
VARS-224ENST00000479051 A0A1W2PQJ5 194 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 SHISA7A6NL88 538 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 GREM1O60565 184 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 CHRNB2P17787 502 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 CHKAP35790 457 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 SCNN1AP37088 669 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 NSFP46459 744 aaKnown RBP21.37■■□□□ 1.01
VARS-224ENST00000479051 GABRB2P47870 512 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 NNTQ13423 1086 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 PON2Q15165 354 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 DGKKQ5KSL6 1271 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 LY6G5CQ5SRR4 150 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 NUGGCQ68CJ6 796 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 OLFML1Q6UWY5 402 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 Q6ZNB5 142 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 SLC26A9Q7LBE3 791 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 UNC45BQ8IWX7 931 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 DQX1Q8TE96 717 aaKnown RBP21.37■■□□□ 1.01
VARS-224ENST00000479051 CD101Q93033 1021 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 AGPAT1Q99943 283 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 P2RY13Q9BPV8 354 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 TTYH3Q9C0H2 523 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 KCNH6Q9H252 994 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 SPHK2Q9NRA0 654 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 MTF2Q9Y483 593 aaPredicted RBP21.37■■□□□ 1.01
VARS-224ENST00000479051 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.37■■□□□ 1.01
VARS-224ENST00000479051 F5P12259 2224 aa21.37■■□□□ 1.01
VARS-224ENST00000479051 ITIH6Q6UXX5 1313 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 MIA3Q5JRA6 1907 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 TRDMT1O14717 391 aaKnown RBP21.36■■□□□ 1.01
VARS-224ENST00000479051 MSI1O43347 362 aaKnown RBP21.36■■□□□ 1.01
VARS-224ENST00000479051 FYNP06241 537 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 RPS9P46781 194 aaKnown RBP21.36■■□□□ 1.01
VARS-224ENST00000479051 TBX4P57082 545 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 CDK17Q00537 523 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 ANO4Q32M45 955 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 PREPLQ4J6C6 727 aaPredicted RBP21.36■■□□□ 1.01
VARS-224ENST00000479051 DCAF6Q58WW2 860 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 PPP1R2P3Q6NXS1 205 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 RHBDF2Q6PJF5 856 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 DENND1CQ8IV53 801 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 CLDN23Q96B33 292 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 ANP32EQ9BTT0 268 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 LMAN1LQ9HAT1 526 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 AIPL1Q9NZN9 384 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 WDR35Q9P2L0 1181 aa21.36■■□□□ 1.01
VARS-224ENST00000479051 COL4A3Q01955 1670 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.35■■□□□ 1.01
VARS-224ENST00000479051 DAB1O75553 588 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 LATS1O95835 1130 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 TNFAIP3P21580 790 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 DRD1P21728 446 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 GBP1P32455 592 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 RING1Q06587 406 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 CLEC16AQ2KHT3 1053 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 FAM102AQ5T9C2 384 aaPredicted RBP21.35■■□□□ 1.01
VARS-224ENST00000479051 IRF2BP2Q7Z5L9 587 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 DEFB106AQ8N104 65 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 DTWD2Q8NBA8 298 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 PIWIL1Q96J94 861 aaKnown RBP21.35■■□□□ 1.01
VARS-224ENST00000479051 SLC2A13Q96QE2 648 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 IER2Q9BTL4 223 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 RRN3Q9NYV6 651 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 AGO1Q9UL18 857 aaKnown RBP21.35■■□□□ 1.01
VARS-224ENST00000479051 TLR6Q9Y2C9 796 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 KMT2EQ8IZD2 1858 aa21.35■■□□□ 1.01
VARS-224ENST00000479051 HOXC11O43248 304 aaPredicted RBP21.34■■□□□ 1.01
VARS-224ENST00000479051 GRAP2O75791 330 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 KLKB1P03952 638 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 CYBBP04839 570 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 CHRNB1P11230 501 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 UNGP13051 313 aaPredicted RBP21.34■■□□□ 1.01
VARS-224ENST00000479051 MMP8P22894 467 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 EIF2DP41214 584 aaKnown RBP21.34■■□□□ 1.01
VARS-224ENST00000479051 SLC11A2P49281 568 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 GALK1P51570 392 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 ZBED6P86452 979 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 CENPCQ03188 943 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 KLHL30Q0D2K2 578 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 TRIM14Q14142 442 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 TAF5Q15542 800 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 TMEM196Q5HYL7 178 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 SYPL2Q5VXT5 272 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 MMS22LQ6ZRQ5 1243 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 TAC4Q86UU9 113 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 XYLT1Q86Y38 959 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 TMEM25Q86YD3 366 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 SYNPOQ8N3V7 929 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 CCDC26Q8TAB7 109 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 XPO6Q96QU8 1125 aaKnown RBP21.34■■□□□ 1.01
VARS-224ENST00000479051 BBS2Q9BXC9 721 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 FAM204AQ9H8W3 233 aa21.34■■□□□ 1.01
VARS-224ENST00000479051 STAP1Q9ULZ2 295 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms