RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 CEP76Q8TAP6 659 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 ERLEC1Q96DZ1 483 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 EEF2KMTQ96G04 330 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 TMEM176AQ96HP8 235 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 HEXIM2Q96MH2 286 aaKnown RBP11.94□□□□□ -0.5
HDLBP-236ENST00000477477 ARID3AQ99856 593 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 CISHQ9NSE2 258 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 RAB20Q9NX57 234 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 CACNA2D2Q9NY47 1150 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 PLK2Q9NYY3 685 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 FBXO10Q9UK96 956 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 ZNF510Q9Y2H8 683 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 ATP6V1DQ9Y5K8 247 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 RAD54BQ9Y620 910 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 FRYQ5TBA9 3013 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 PLXND1Q9Y4D7 1925 aa11.94□□□□□ -0.5
HDLBP-236ENST00000477477 CETN3O15182 167 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 STX10O60499 249 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 EPB41P11171 864 aaKnown RBP11.93□□□□□ -0.5
HDLBP-236ENST00000477477 CORO1AP31146 461 aaKnown RBP11.93□□□□□ -0.5
HDLBP-236ENST00000477477 CHKAP35790 457 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 RAD23BP54727 409 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 COG7P83436 770 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 ZNF33AQ06730 810 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 EFEMP1Q12805 493 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 FOXC1Q12948 553 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 DUOXA1Q1HG43 343 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 RAB41Q5JT25 222 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 FYB2Q5VWT5 728 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 PIGZQ86VD9 579 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 SLC41A1Q8IVJ1 513 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 ARHGAP18Q8N392 663 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 DEFB119Q8N690 84 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 DEFB124Q8NES8 71 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 CCDC34Q96HJ3 373 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 MRGPRX1Q96LB2 322 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 UBXN6Q9BZV1 441 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 DCLK3Q9C098 648 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 FAM124BQ9H5Z6 455 aaPredicted RBP11.93□□□□□ -0.5
HDLBP-236ENST00000477477 CAPN10Q9HC96 672 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 FSCN3Q9NQT6 498 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 SLC6A14Q9UN76 642 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 CYP8B1Q9UNU6 501 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 WASF3Q9UPY6 502 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 SLC27A6Q9Y2P4 619 aa11.93□□□□□ -0.5
HDLBP-236ENST00000477477 TNRC6BQ9UPQ9 1833 aaKnown RBP11.93□□□□□ -0.5
HDLBP-236ENST00000477477 MYO18AQ92614 2054 aaKnown RBP11.92□□□□□ -0.5
HDLBP-236ENST00000477477 WASH3PC4AMC7 463 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 HMBSP08397 361 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 SERPINF2P08697 491 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 MFAP3P55082 362 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 YWHAGP61981 247 aaKnown RBP eCLIP11.92□□□□□ -0.5
HDLBP-236ENST00000477477 GEN1Q17RS7 908 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 CBWD6Q4V339 395 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 CBWD3Q5JTY5 395 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 CBWD5Q5RIA9 395 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 KIAA1324Q6UXG2 1013 aaKnown RBP11.92□□□□□ -0.5
HDLBP-236ENST00000477477 RABEPKQ7Z6M1 372 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 TRIML1Q8N9V2 468 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 ANKRD52Q8NB46 1076 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 HSPA12BQ96MM6 686 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 SLC6A17Q9H1V8 727 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 SLC32A1Q9H598 525 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 GDPD2Q9HCC8 539 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 CD93Q9NPY3 652 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 MARCH2Q9P0N8 246 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 AGO1Q9UL18 857 aaKnown RBP11.92□□□□□ -0.5
HDLBP-236ENST00000477477 STRIP2Q9ULQ0 834 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 STON1Q9Y6Q2 735 aa11.92□□□□□ -0.5
HDLBP-236ENST00000477477 MYH10P35580 1976 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 SLC12A8A0AV02 714 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 UPK3BL1B0FP48 263 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 UPK3BL2E5RIL1 263 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 NPC1O15118 1278 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 SLC16A3O15427 465 aaKnown RBP11.91□□□□□ -0.5
HDLBP-236ENST00000477477 TOP3BO95985 862 aaKnown RBP11.91□□□□□ -0.5
HDLBP-236ENST00000477477 PROS1P07225 676 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 SPINK2P20155 84 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 TKTL1P51854 596 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 ATXN3P54252 364 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-236ENST00000477477 SLC8A3P57103 927 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 GFPT1Q06210 699 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-236ENST00000477477 SEMA3BQ13214 749 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 PNOCQ13519 176 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 ENPP2Q13822 863 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 STARD3Q14849 445 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 GOLGA7BQ2TAP0 167 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 FUT11Q495W5 492 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 DCAF17Q5H9S7 520 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-236ENST00000477477 PM20D1Q6GTS8 502 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 UNQ6494/PRO21346Q6UXR6 183 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 RSRC2Q7L4I2 434 aaKnown RBP11.91□□□□□ -0.5
HDLBP-236ENST00000477477 BHLHA9Q7RTU4 235 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 PIP4P1Q86T03 277 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 FAM217AQ8IXS0 508 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 ZC3H3Q8IXZ2 948 aaKnown RBP11.91□□□□□ -0.5
HDLBP-236ENST00000477477 CPXM2Q8N436 756 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 HDDC3Q8N4P3 179 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 TATDN2Q93075 761 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 ZNF419Q96HQ0 510 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms