RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 FUT11Q495W5 492 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ATP13A4Q4VNC1 1196 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MZT2AQ6P582 158 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 RFWD3Q6PCD5 774 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ANGPTL8Q6UXH0 198 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 BNC2Q6ZN30 1099 aaPredicted RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 BEND4Q6ZU67 534 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 PIK3AP1Q6ZUJ8 805 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 SPATC1Q76KD6 591 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 RNF180Q86T96 592 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 DPP9Q86TI2 863 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 NKAIN4Q8IVV8 208 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ADGRG5Q8IZF4 528 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 AHI1Q8N157 1196 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 PHTF2Q8N3S3 785 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 GALNT4Q8N4A0 578 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 FAM109AQ8N4B1 249 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MARVELD2Q8N4S9 558 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 FAM169BQ8N8A8 192 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ASCC1Q8N9N2 400 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 GRPEL2Q8TAA5 225 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 KCTD4Q8WVF5 259 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TRUB1Q8WWH5 349 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 LRRC59Q96AG4 307 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 LRRC37BQ96QE4 947 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 RANBP9Q96S59 729 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 CDK5RAP1Q96SZ6 601 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 FAM129BQ96TA1 746 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 NUP88Q99567 741 aaPredicted RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 C17orf62Q9BQA9 187 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 C1QTNF7Q9BXJ2 289 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 NUSAP1Q9BXS6 441 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 MROQ9BYG7 248 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MTFR1LQ9H019 292 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ZNF696Q9H7X3 374 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.29□□□□□ -1.72
CD55-208ENST00000476590 REV1Q9UBZ9 1251 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ADD3Q9UEY8 706 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 FBXO40Q9UH90 709 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 PCOLCE2Q9UKZ9 415 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 SIK3Q9Y2K2 1263 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TMX2Q9Y320 296 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ZNF175Q9Y473 711 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 PCDHB9Q9Y5E1 797 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 CDC42BPBQ9Y5S2 1711 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 IQGAP1P46940 1657 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 PREX1Q8TCU6 1659 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 ADGRB3O60242 1522 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 MYH6P13533 1939 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 ZFYVE9O95405 1425 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 PSME4Q14997 1843 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 ZSCAN5CA6NGD5 496 aaPredicted RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 PRSS44E7EML9 344 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 PI4K2BG5E9Z4 385 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 H3BRJ5 948 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 ZNF701M0R085 212 aaPredicted RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 RGS16O15492 202 aaPredicted RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 SSX5O60225 188 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 GREM1O60565 184 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 FAM13AO94988 1023 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 ASS1P00966 412 aaKnown RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 INHBBP09529 407 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 T-ENOLP0DO92 83 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 RARGP13631 454 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 CCDC130P13994 396 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 PFKFB1P16118 471 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 PDE6AP16499 860 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 SHMT1P34896 483 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 RFC1P35251 1148 aaPredicted RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 BMPR1AP36894 532 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 ASMTP46597 345 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 HK2P52789 917 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 TPTEP56180 551 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 NLRP11P59045 1033 aaKnown RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 POU6F2P78424 691 aaPredicted RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 ACY1Q03154 408 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 STX3Q13277 289 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 APOFQ13790 326 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 SNX17Q15036 470 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 OXA1LQ15070 435 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 MTFR1Q15390 333 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 ALX1Q15699 326 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 GFOD2Q3B7J2 385 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 TBRG1Q3YBR2 411 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 C2orf27AQ580R0 203 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 HSP90AA4PQ58FG1 418 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 OR7E24Q6IFN5 339 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 PLEKHA7Q6IQ23 1121 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 C15orf52Q6ZUT6 534 aaKnown RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 IKBIPQ70UQ0 350 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 LPCAT2Q7L5N7 544 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 APTXQ7Z2E3 356 aaKnown RBP4.28□□□□□ -1.72
CD55-208ENST00000476590 SLFN11Q7Z7L1 901 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 ATCAYQ86WG3 371 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 STX12Q86Y82 276 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 TRIM59Q8IWR1 403 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 CCDC33Q8N5R6 958 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 VGLL2Q8N8G2 317 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 LINC00301Q8NCQ3 95 aa4.28□□□□□ -1.72
CD55-208ENST00000476590 PNMA1Q8ND90 353 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms