RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.74□□□□□ -0.37
MRPL55-227ENST00000475832 TMEM30AQ9NV96 361 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.74□□□□□ -0.37
MRPL55-227ENST00000475832 SMARCAL1Q9NZC9 954 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 RASAL2Q9UJF2 1139 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 NAALADL1Q9UQQ1 740 aa12.74□□□□□ -0.37
MRPL55-227ENST00000475832 SLC38A8A6NNN8 435 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 PI4K2BG5E9Z4 385 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 RFXAPO00287 272 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 PHF2O75151 1096 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 ENDOD1O94919 500 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 ABLIM3O94929 683 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 CXCL14O95715 111 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 RHOXF2BP0C7M4 288 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 CSH1P0DML2 217 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 CSH2P0DML3 217 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 KDELR1P24390 212 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 ZNF135P52742 658 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-227ENST00000475832 EPHB3P54753 998 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 CDH6P55285 790 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 HDAC4P56524 1084 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 LMNB2Q03252 620 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 ELF2Q15723 593 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 SMTNL2Q2TAL5 461 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 KCNT1Q5JUK3 1230 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 TRNP1Q6NT89 227 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 ADAT2Q7Z6V5 191 aaKnown RBP12.73□□□□□ -0.37
MRPL55-227ENST00000475832 ITIH5Q86UX2 942 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 RFX6Q8HWS3 928 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 ARFGAP1Q8N6T3 406 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 LRRN4CLQ8ND94 238 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 CMASQ8NFW8 434 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-227ENST00000475832 GRK7Q8WTQ7 553 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 OVCA2Q8WZ82 227 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 EDEM1Q92611 657 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 NT5C3BQ969T7 300 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 MAGOHBQ96A72 148 aaKnown RBP12.73□□□□□ -0.37
MRPL55-227ENST00000475832 PGAP3Q96FM1 320 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-227ENST00000475832 RHOXF2Q9BQY4 288 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 C11orf84Q9BUA3 381 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-227ENST00000475832 PRDM16Q9HAZ2 1276 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 KLHL11Q9NVR0 708 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 DDIT4Q9NX09 232 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.73□□□□□ -0.37
MRPL55-227ENST00000475832 LMCD1Q9NZU5 365 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 MTCH2Q9Y6C9 303 aa12.73□□□□□ -0.37
MRPL55-227ENST00000475832 SYNJ2BP-COX16A0A087WUM0 186 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-227ENST00000475832 ZNF487B1APH4 448 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 H3BNC9 293 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 ERLIN1O75477 346 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 SLC2A3P11169 496 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 TCF4P15884 667 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 ZFXP17010 805 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-227ENST00000475832 IL1R2P27930 398 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 ARL4AP40617 200 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 CDKN2BP42772 138 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 FNTAP49354 379 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 MTA1Q13330 715 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 DHX34Q14147 1143 aaKnown RBP12.72□□□□□ -0.37
MRPL55-227ENST00000475832 ATP13A4Q4VNC1 1196 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 SH3PXD2AQ5TCZ1 1133 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 KAZNQ674X7 775 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 AADACL2Q6P093 401 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 ELMSAN1Q6PJG2 1045 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 MFSD7Q6UXD7 560 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 CCDC149Q6ZUS6 474 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 HFE2Q6ZVN8 426 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 NOA1Q8NC60 698 aaKnown RBP12.72□□□□□ -0.37
MRPL55-227ENST00000475832 STKLD1Q8NE28 680 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 MICAL1Q8TDZ2 1067 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 RAPGEF5Q92565 580 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 SERPINB11Q96P15 392 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 HEMGNQ9BXL5 484 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 DHX35Q9H5Z1 703 aaKnown RBP12.72□□□□□ -0.37
MRPL55-227ENST00000475832 WDCPQ9H6R7 721 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 CLIC5Q9NZA1 410 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 IL37Q9NZH6 218 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 COX16Q9P0S2 106 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 UXTQ9UBK9 157 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-227ENST00000475832 AP4E1Q9UPM8 1137 aa12.72□□□□□ -0.37
MRPL55-227ENST00000475832 COL4A4P53420 1690 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-227ENST00000475832 MYH10P35580 1976 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 hCG_1818297A0A087WSY0 165 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 A0A1W2PQH9 124 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 FAM92AA1XBS5 289 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 FAM187AA6NFU0 413 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 H3BRJ5 948 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 TEX28O15482 410 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 ADAM12O43184 909 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 KLRC2P26717 231 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 PPP3CCP48454 512 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 GPR15P49685 360 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 KPNA1P52294 538 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-227ENST00000475832 DR1Q01658 176 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 BRMS1LQ5PSV4 323 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 SYPL2Q5VXT5 272 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 TXNRD3NBQ6F5E7 133 aa12.71□□□□□ -0.37
MRPL55-227ENST00000475832 PDE12Q6L8Q7 609 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms