RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 NOMO3P69849 1222 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 CDK17Q00537 523 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 SLC6A3Q01959 620 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 PTPN20Q4JDL3 420 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 DCAF6Q58WW2 860 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 FIGNQ5HY92 759 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 LY6G5CQ5SRR4 150 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 NUGGCQ68CJ6 796 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 MSANTD2Q6P1R3 559 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 RHBDF2Q6PJF5 856 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 NUDT18Q6ZVK8 323 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 FAM183BPQ6ZVS7 135 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 DENND1CQ8IV53 801 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 CD101Q93033 1021 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 AGPAT1Q99943 283 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 P2RY13Q9BPV8 354 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 XPO4Q9C0E2 1151 aaKnown RBP14.35□□□□□ -0.11
USF1-205ENST00000473969 KCNH6Q9H252 994 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 SPHK2Q9NRA0 654 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 WDR35Q9P2L0 1181 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 SLC12A6Q9UHW9 1150 aa14.35□□□□□ -0.11
USF1-205ENST00000473969 MTF2Q9Y483 593 aaPredicted RBP14.35□□□□□ -0.11
USF1-205ENST00000473969 OTOL1A6NHN0 477 aaPredicted RBP14.34□□□□□ -0.11
USF1-205ENST00000473969 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.34□□□□□ -0.11
USF1-205ENST00000473969 TRDMT1O14717 391 aaKnown RBP14.34□□□□□ -0.11
USF1-205ENST00000473969 CYP1A1P04798 512 aaPredicted RBP14.34□□□□□ -0.11
USF1-205ENST00000473969 TPM1P09493 284 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 DRD1P21728 446 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 RPS9P46781 194 aaKnown RBP14.34□□□□□ -0.11
USF1-205ENST00000473969 GABRB2P47870 512 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 SLC11A2P49281 568 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 GALK1P51570 392 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 RNASE9P60153 205 aaKnown RBP14.34□□□□□ -0.11
USF1-205ENST00000473969 FMO1Q01740 532 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 TRIP4Q15650 581 aaPredicted RBP14.34□□□□□ -0.11
USF1-205ENST00000473969 FAM102AQ5T9C2 384 aaPredicted RBP14.34□□□□□ -0.11
USF1-205ENST00000473969 PPP1R2P3Q6NXS1 205 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 TXNDC11Q6PKC3 985 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 TPGS1Q6ZTW0 290 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 CCDC105Q8IYK2 499 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 DEFB106AQ8N104 65 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 DTWD2Q8NBA8 298 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 CCDC26Q8TAB7 109 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 CPLX3Q8WVH0 158 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 BAP1Q92560 729 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 RNF34Q969K3 372 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 WBP2Q969T9 261 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 XPO6Q96QU8 1125 aaKnown RBP14.34□□□□□ -0.11
USF1-205ENST00000473969 DDX50Q9BQ39 737 aaKnown RBP14.34□□□□□ -0.11
USF1-205ENST00000473969 BBS2Q9BXC9 721 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 TJP2Q9UDY2 1190 aa14.34□□□□□ -0.11
USF1-205ENST00000473969 FAM170AA1A519 330 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 NEDD8-MDP1E9PL57 170 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 MSI1O43347 362 aaKnown RBP14.33□□□□□ -0.12
USF1-205ENST00000473969 GRAP2O75791 330 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 APOEP02649 317 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 CHRNB2P17787 502 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 RING1Q06587 406 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 KLHL30Q0D2K2 578 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 FBXO43Q4G163 708 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 Q6ZNB5 142 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 SLC26A9Q7LBE3 791 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 TMEM25Q86YD3 366 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 SYNPOQ8N3V7 929 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 DQX1Q8TE96 717 aaKnown RBP14.33□□□□□ -0.12
USF1-205ENST00000473969 CLDN23Q96B33 292 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 IER2Q9BTL4 223 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 IRF2BPLQ9H1B7 796 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 FAM204AQ9H8W3 233 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 SPATA6Q9NWH7 488 aaPredicted RBP14.33□□□□□ -0.12
USF1-205ENST00000473969 RRN3Q9NYV6 651 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 AIPL1Q9NZN9 384 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 AGO1Q9UL18 857 aaKnown RBP14.33□□□□□ -0.12
USF1-205ENST00000473969 STAP1Q9ULZ2 295 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 TLR6Q9Y2C9 796 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 LUC7L2Q9Y383 392 aaKnown RBP14.33□□□□□ -0.12
USF1-205ENST00000473969 TICRRQ7Z2Z1 1910 aa14.33□□□□□ -0.12
USF1-205ENST00000473969 A0A1W2PQJ5 194 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 GOLGA8SH3BPF8 625 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 HOXC11O43248 304 aaPredicted RBP14.32□□□□□ -0.12
USF1-205ENST00000473969 LAMTOR5O43504 91 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 GALR2O43603 387 aaPredicted RBP14.32□□□□□ -0.12
USF1-205ENST00000473969 GREM1O60565 184 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 DAB1O75553 588 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 LATS1O95835 1130 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 TRUB2O95900 331 aaKnown RBP14.32□□□□□ -0.12
USF1-205ENST00000473969 KLKB1P03952 638 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 APODP05090 189 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 CALB1P05937 261 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 FYNP06241 537 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 SLC2A3P11169 496 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 CHRNB1P11230 501 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 NOS2P35228 1153 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 SCNN1AP37088 669 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 PBX1P40424 430 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 EIF2DP41214 584 aaKnown RBP14.32□□□□□ -0.12
USF1-205ENST00000473969 ZBED6P86452 979 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 NNTQ13423 1086 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 TRIM14Q14142 442 aa14.32□□□□□ -0.12
USF1-205ENST00000473969 PPP2R5DQ14738 602 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms